RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 SH2D1AO60880 128 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 SMIM17P0DL12 118 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 PVALBP20472 110 aaPredicted RBP3.47□□□□□ -1.85
COL11A1-209ENST00000475980 PCOTHQ58A44 107 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 AP1S3Q96PC3 154 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 WDR61Q9GZS3 305 aaKnown RBP3.47□□□□□ -1.85
COL11A1-209ENST00000475980 VCX3BQ9H321 246 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 NDUFA12Q9UI09 145 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 EPDR1Q9UM22 224 aa3.47□□□□□ -1.85
COL11A1-209ENST00000475980 COX7A2LO14548 114 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 SNAI2O43623 268 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 MALP21145 153 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 CTRLP40313 264 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 NKX2-5P52952 324 aaPredicted RBP3.46□□□□□ -1.86
COL11A1-209ENST00000475980 AP3S2P59780 193 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 VBP1P61758 197 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 RNASEKQ6P5S7 137 aaKnown RBP3.46□□□□□ -1.86
COL11A1-209ENST00000475980 Q86TA4 180 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 KRTAP13-1Q8IUC0 172 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 OR10D4PQ8NGN7 298 aa3.46□□□□□ -1.86
COL11A1-209ENST00000475980 LSM5Q9Y4Y9 91 aaKnown RBP3.46□□□□□ -1.86
COL11A1-209ENST00000475980 KMT2DO14686 5537 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 NCR2O95944 276 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 SPAG11BQ08648 103 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 TMEM241Q24JQ0 296 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 SUMO4Q6EEV6 95 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 RASL11AQ6T310 242 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 FAM19A2Q8N3H0 131 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 NIT2Q9NQR4 276 aa3.45□□□□□ -1.86
COL11A1-209ENST00000475980 TMSB15BA0A087X1C1 80 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 RGS5O15539 181 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 NTF3P20783 257 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 LBHQ53QV2 105 aaPredicted RBP3.44□□□□□ -1.86
COL11A1-209ENST00000475980 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
COL11A1-209ENST00000475980 SPANXN1Q5VSR9 72 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 FUNDC2Q9BWH2 189 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 GAGE2DQ9UEU5 116 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 ZFP30Q9Y2G7 519 aa3.44□□□□□ -1.86
COL11A1-209ENST00000475980 C1orf196B1AJZ1 125 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 NDUFA1O15239 70 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 SPINK1P00995 79 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 ARL14EPLP0DKL9 152 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
COL11A1-209ENST00000475980 SUMO1P63165 101 aaKnown RBP3.43□□□□□ -1.86
COL11A1-209ENST00000475980 TMEM101Q96IK0 257 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 BTF3L4Q96K17 158 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 TP73-AS1Q9UF72 201 aa3.43□□□□□ -1.86
COL11A1-209ENST00000475980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.42□□□□□ -1.86
COL11A1-209ENST00000475980 A0A1W2PPV4 95 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 IGKV2-29A2NJV5 120 aaPredicted RBP3.42□□□□□ -1.86
COL11A1-209ENST00000475980 NDUFC2-KCTD14E9PQ53 114 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 NDUFB6O95139 128 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 APCSP02743 223 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 STAG3L2P0CL84 134 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 STAG3L3P0CL85 134 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 NHLH2Q02577 135 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 Q6ZNX1 250 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 TOMM5Q8N4H5 51 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 C3orf22Q8N5N4 141 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 VCX3AQ9NNX9 186 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 CDC42SE2Q9NRR3 84 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 C6orf48Q9UBA6 75 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 C22orf24Q9Y442 160 aa3.42□□□□□ -1.86
COL11A1-209ENST00000475980 A0A1W2PRE2 83 aa3.41□□□□□ -1.86
COL11A1-209ENST00000475980 MGPP08493 103 aa3.41□□□□□ -1.86
COL11A1-209ENST00000475980 IL15RAQ13261 267 aa3.41□□□□□ -1.86
COL11A1-209ENST00000475980 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
COL11A1-209ENST00000475980 MRPL52Q86TS9 123 aaKnown RBP3.41□□□□□ -1.86
COL11A1-209ENST00000475980 TRBV30A0A0K0K1B3 111 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 PEX7O00628 323 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 MT2AP02795 61 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 GCHFRP30047 84 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 RAB32Q13637 225 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 Q8N377 158 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 HIST1H2BAQ96A08 127 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 PACRGQ96M98 296 aaPredicted RBP3.4□□□□□ -1.87
COL11A1-209ENST00000475980 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 Q9H521 79 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 CYTL1Q9NRR1 136 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 TMEM167BQ9NRX6 74 aa3.4□□□□□ -1.87
COL11A1-209ENST00000475980 MUC21A0A140T8X8 626 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 LTAP01374 205 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 UNQ6190/PRO20217Q6UXQ8 127 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 MRPL55Q7Z7F7 128 aaKnown RBP3.39□□□□□ -1.87
COL11A1-209ENST00000475980 ORAOV1Q8WV07 137 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 FMC1Q96HJ9 113 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 FAM210AQ96ND0 272 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 ALG5Q9Y673 324 aa3.39□□□□□ -1.87
COL11A1-209ENST00000475980 FAM25EA8MYX2 175 aa3.38□□□□□ -1.87
COL11A1-209ENST00000475980 HMGB3O15347 200 aaKnown RBP3.38□□□□□ -1.87
COL11A1-209ENST00000475980 CDC34P49427 236 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-209ENST00000475980 UBE2AP49459 152 aa3.38□□□□□ -1.87
COL11A1-209ENST00000475980 C5orf38Q86SI9 138 aa3.38□□□□□ -1.87
COL11A1-209ENST00000475980 Q8NBF4 154 aa3.38□□□□□ -1.87
COL11A1-209ENST00000475980 NKX6-2Q9C056 277 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-209ENST00000475980 A0A087WXM4 84 aa3.37□□□□□ -1.87
COL11A1-209ENST00000475980 SLC25A20O43772 301 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms