RNA–Protein interactions for RNA: ENST00000475060.1

CTPS1-207, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-207ENST00000475060 C10orf126Q8N4M7 172 aa4.64□□□□□ -1.67
CTPS1-207ENST00000475060 VSIG2Q96IQ7 327 aa4.64□□□□□ -1.67
CTPS1-207ENST00000475060 LITAFQ99732 161 aa4.64□□□□□ -1.67
CTPS1-207ENST00000475060 SPANXDQ9BXN6 97 aa4.64□□□□□ -1.67
CTPS1-207ENST00000475060 SPANXCQ9NY87 97 aa4.64□□□□□ -1.67
CTPS1-207ENST00000475060 Q9UF83 564 aa4.64□□□□□ -1.67
CTPS1-207ENST00000475060 IGHV3OR16-12A0A075B7B8 117 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 TRGV1A0A0A0MS02 117 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 IGHV3-73A0A0B4J1V6 119 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 A0A1W2PRX2 142 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 M0QXV9 152 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 LY6G6DO95868 133 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 HTN1P15515 57 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 EMP1P54849 157 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 HERVK_113P63121 156 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 LYRM7Q5U5X0 104 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 NTM-AS1Q6ZSK4 140 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 Q6ZTI0 123 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 RAB37Q96AX2 223 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
CTPS1-207ENST00000475060 WNK1Q9H4A3 2382 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 FASNP49327 2511 aaKnown RBP4.62□□□□□ -1.67
CTPS1-207ENST00000475060 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
CTPS1-207ENST00000475060 NDUFA1O15239 70 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 GHRHP01286 108 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 IFITM1P13164 125 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 SRSF9Q13242 221 aaKnown RBP eCLIP4.62□□□□□ -1.67
CTPS1-207ENST00000475060 C11orf44Q8N8P7 122 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 ATP6V0E2Q8NHE4 81 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 CDC42SE2Q9NRR3 84 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 CBY1Q9Y3M2 126 aa4.62□□□□□ -1.67
CTPS1-207ENST00000475060 TRBV20-1A0A075B6N2 111 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
CTPS1-207ENST00000475060 IGKV2-29A2NJV5 120 aaPredicted RBP4.61□□□□□ -1.67
CTPS1-207ENST00000475060 TSPAN13O95857 204 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 CFC1P0CG37 223 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 RPL24P83731 157 aaKnown RBP4.61□□□□□ -1.67
CTPS1-207ENST00000475060 FHL2Q14192 279 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 LINC00242Q5T6M2 205 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 C9orf66Q5T8R8 295 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 HIST2H2BDQ6DRA6 164 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 WFDC9Q8NEX5 89 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 CITED1Q99966 193 aa4.61□□□□□ -1.67
CTPS1-207ENST00000475060 NOP10Q9NPE3 64 aaKnown RBP4.61□□□□□ -1.67
CTPS1-207ENST00000475060 SETXQ7Z333 2677 aaKnown RBP4.61□□□□□ -1.67
CTPS1-207ENST00000475060 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
CTPS1-207ENST00000475060 C2CD3Q4AC94 2353 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 F5H768 121 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 G3V4G9 280 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 EIF4EBP3O60516 100 aaPredicted RBP4.6□□□□□ -1.67
CTPS1-207ENST00000475060 IGHV3-33P01772 117 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 MIAQ16674 131 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 CEMP1Q6PRD7 247 aaPredicted RBP4.6□□□□□ -1.67
CTPS1-207ENST00000475060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.6□□□□□ -1.67
CTPS1-207ENST00000475060 NAA38Q9BRA0 125 aaKnown RBP4.6□□□□□ -1.67
CTPS1-207ENST00000475060 WFDC10AQ9H1F0 79 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 CDKN2A-AS1Q9UH64 79 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 PRO1854Q9UHT4 67 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 NDUFA12Q9UI09 145 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 X6R8D5 127 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 JMJD1CQ15652 2540 aa4.6□□□□□ -1.67
CTPS1-207ENST00000475060 IGHV3-38A0A0C4DH36 116 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 A4D1N5 150 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 LYRM9A8MSI8 78 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 CRLF1O75462 422 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 PF4P02776 101 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 LINC01561Q8N1V8 128 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 DEFB104AQ8WTQ1 72 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 ZNF625Q96I27 306 aaPredicted RBP4.59□□□□□ -1.67
CTPS1-207ENST00000475060 TMEM101Q96IK0 257 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 TMEM243Q9BU79 118 aa4.59□□□□□ -1.67
CTPS1-207ENST00000475060 GEMIN7Q9H840 131 aaKnown RBP4.59□□□□□ -1.67
CTPS1-207ENST00000475060 NF1P21359 2839 aa4.59□□□□□ -1.68
CTPS1-207ENST00000475060 TRBV6-8A0A0A6YYG3 113 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 TRAV8-3A0A0A6YYJ7 113 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 H3BMG7 143 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 FAM229AH3BQW9 127 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 RPL35AP18077 110 aaKnown RBP4.58□□□□□ -1.68
CTPS1-207ENST00000475060 HERV-K104P63124 156 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 GAGE13Q4V321 117 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 SFTA2Q6UW10 78 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 MUSTN1Q8IVN3 82 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 COPS9Q8WXC6 57 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 SMR3AQ99954 134 aa4.58□□□□□ -1.68
CTPS1-207ENST00000475060 FN1P02751 2386 aaKnown RBP4.58□□□□□ -1.68
CTPS1-207ENST00000475060 NOTCH3Q9UM47 2321 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 TRGV2A0A075B6R0 118 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 GAGE12JA6NER3 117 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 INAFM1C9JVW0 142 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 GAGE7O76087 117 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 GAGE12FP0CL80 117 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 GAGE12GP0CL81 117 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 GAGE12IP0CL82 117 aa4.57□□□□□ -1.68
CTPS1-207ENST00000475060 COX6A2Q02221 97 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms