RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 Q8N976 141 aa13.25□□□□□ -0.29
NOTCH4-204ENST00000474612 TRBV6-5A0A0K0K1A5 114 aa13.24□□□□□ -0.29
NOTCH4-204ENST00000474612 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
NOTCH4-204ENST00000474612 NPSP0C0P6 89 aa13.24□□□□□ -0.29
NOTCH4-204ENST00000474612 H3BT86 120 aa13.23□□□□□ -0.29
NOTCH4-204ENST00000474612 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
NOTCH4-204ENST00000474612 C16orf95Q9H693 158 aa13.22□□□□□ -0.29
NOTCH4-204ENST00000474612 TRBV27A0A0K0K1C4 114 aa13.22□□□□□ -0.29
NOTCH4-204ENST00000474612 TDRG1Q3Y452 100 aa13.22□□□□□ -0.29
NOTCH4-204ENST00000474612 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
NOTCH4-204ENST00000474612 PROK1P58294 105 aa13.22□□□□□ -0.29
NOTCH4-204ENST00000474612 PYGO1Q9Y3Y4 419 aa13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 CD164L2Q6UWJ8 174 aa13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 A0A0J9YWU9 116 aa13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 M0R2N4 97 aa13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 CRIP2P52943 208 aaPredicted RBP13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 CLEC2BQ92478 149 aa13.21□□□□□ -0.29
NOTCH4-204ENST00000474612 A0A1W2PPR1 153 aa13.21□□□□□ -0.3
NOTCH4-204ENST00000474612 TEN1Q86WV5 123 aa13.21□□□□□ -0.3
NOTCH4-204ENST00000474612 H0Y9J4 135 aa13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 MRGPRG-AS1Q2M3A8 158 aa13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 RNASE3P12724 160 aaKnown RBP13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 PIK3CD-AS1Q5SR53 167 aa13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 JMJD1CQ15652 2540 aa13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 PTPRSQ13332 1948 aa13.2□□□□□ -0.3
NOTCH4-204ENST00000474612 NUPR2A6NF83 97 aa13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 IGLV1-51P01701 117 aa13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 CHKB-CPT1BH3BT56 60 aa13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 IGLV2-11P01706 119 aa13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 DOPEY1Q5JWR5 2465 aa13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 C9orf85Q96MD7 179 aa13.19□□□□□ -0.3
NOTCH4-204ENST00000474612 TMEM223A0PJW6 202 aa13.18□□□□□ -0.3
NOTCH4-204ENST00000474612 CDPF1Q6NVV7 123 aa13.18□□□□□ -0.3
NOTCH4-204ENST00000474612 CLUHP3Q96NS8 147 aa13.18□□□□□ -0.3
NOTCH4-204ENST00000474612 ZNF580Q9UK33 172 aa13.18□□□□□ -0.3
NOTCH4-204ENST00000474612 XAGE1AQ9HD64 81 aa13.17□□□□□ -0.3
NOTCH4-204ENST00000474612 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
NOTCH4-204ENST00000474612 SPANXB1Q9NS25 103 aaPredicted RBP13.17□□□□□ -0.3
NOTCH4-204ENST00000474612 RNF185Q96GF1 192 aa13.17□□□□□ -0.3
NOTCH4-204ENST00000474612 IGLV4-69A0A075B6H9 119 aa13.16□□□□□ -0.3
NOTCH4-204ENST00000474612 U3KQK5 164 aa13.16□□□□□ -0.3
NOTCH4-204ENST00000474612 PRR9Q5T870 116 aa13.16□□□□□ -0.3
NOTCH4-204ENST00000474612 IGKV3D-7A0A0C4DH55 119 aa13.15□□□□□ -0.3
NOTCH4-204ENST00000474612 BRI3O95415 125 aa13.15□□□□□ -0.3
NOTCH4-204ENST00000474612 TNRC6BQ9UPQ9 1833 aaKnown RBP13.15□□□□□ -0.3
NOTCH4-204ENST00000474612 C2CD3Q4AC94 2353 aa13.15□□□□□ -0.3
NOTCH4-204ENST00000474612 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
NOTCH4-204ENST00000474612 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
NOTCH4-204ENST00000474612 A0A096LNI7 61 aa13.14□□□□□ -0.31
NOTCH4-204ENST00000474612 PLXNB1O43157 2135 aa13.14□□□□□ -0.31
NOTCH4-204ENST00000474612 ZFYVE26Q68DK2 2539 aa13.13□□□□□ -0.31
NOTCH4-204ENST00000474612 LOC100131303A0A0U1RQF7 123 aa13.13□□□□□ -0.31
NOTCH4-204ENST00000474612 TSHBP01222 138 aa13.13□□□□□ -0.31
NOTCH4-204ENST00000474612 LOC107984640A0A0U1RRK4 108 aa13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 LINC00308Q8TCZ7 52 aa13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 LINC00959A0A1B0GUT2 108 aa13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 IGKV2D-26A0A0A0MRZ7 120 aa13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 ZNF706Q9Y5V0 76 aaPredicted RBP13.12□□□□□ -0.31
NOTCH4-204ENST00000474612 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
NOTCH4-204ENST00000474612 TMEM258P61165 79 aa13.11□□□□□ -0.31
NOTCH4-204ENST00000474612 DSCAML1Q8TD84 2053 aa13.1□□□□□ -0.31
NOTCH4-204ENST00000474612 UBE2D3P61077 147 aa13.1□□□□□ -0.31
NOTCH4-204ENST00000474612 UBE2D2P62837 147 aa13.1□□□□□ -0.31
NOTCH4-204ENST00000474612 UBE2D1P51668 147 aa13.1□□□□□ -0.31
NOTCH4-204ENST00000474612 CHCHD7Q9BUK0 85 aa13.09□□□□□ -0.31
NOTCH4-204ENST00000474612 ATOX1O00244 68 aa13.09□□□□□ -0.31
NOTCH4-204ENST00000474612 BPY2O14599 106 aa13.09□□□□□ -0.31
NOTCH4-204ENST00000474612 SMIM20Q8N5G0 67 aa13.09□□□□□ -0.31
NOTCH4-204ENST00000474612 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.31
NOTCH4-204ENST00000474612 WFDC2Q14508 124 aa13.08□□□□□ -0.31
NOTCH4-204ENST00000474612 POLR2KP53803 58 aaKnown RBP13.08□□□□□ -0.32
NOTCH4-204ENST00000474612 PRM2P04554 102 aa13.08□□□□□ -0.32
NOTCH4-204ENST00000474612 NRACQ8N912 160 aa13.08□□□□□ -0.32
NOTCH4-204ENST00000474612 UBE2D4Q9Y2X8 147 aa13.08□□□□□ -0.32
NOTCH4-204ENST00000474612 ABCA12Q86UK0 2595 aa13.08□□□□□ -0.32
NOTCH4-204ENST00000474612 M0R378 163 aa13.07□□□□□ -0.32
NOTCH4-204ENST00000474612 TAX1BP3O14907 124 aa13.07□□□□□ -0.32
NOTCH4-204ENST00000474612 CEP295Q9C0D2 2601 aa13.07□□□□□ -0.32
NOTCH4-204ENST00000474612 C14orf132Q9NPU4 83 aa13.07□□□□□ -0.32
NOTCH4-204ENST00000474612 TRAV23DV6A0A075B6W5 121 aa13.06□□□□□ -0.32
NOTCH4-204ENST00000474612 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
NOTCH4-204ENST00000474612 RETNQ9HD89 108 aa13.05□□□□□ -0.32
NOTCH4-204ENST00000474612 TIMM17BO60830 172 aa13.05□□□□□ -0.32
NOTCH4-204ENST00000474612 ANKRD11Q6UB99 2663 aaPredicted RBP13.05□□□□□ -0.32
NOTCH4-204ENST00000474612 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
NOTCH4-204ENST00000474612 C6orf99Q4VX62 202 aa13.04□□□□□ -0.32
NOTCH4-204ENST00000474612 DHRS4-AS1Q9P1J3 65 aa13.04□□□□□ -0.32
NOTCH4-204ENST00000474612 FOXI1Q12951 378 aa13.04□□□□□ -0.32
NOTCH4-204ENST00000474612 EDN2P20800 178 aa13.03□□□□□ -0.32
NOTCH4-204ENST00000474612 IGKV2-28A0A075B6P5 120 aa13.03□□□□□ -0.32
NOTCH4-204ENST00000474612 IGKV2D-28P01615 120 aa13.03□□□□□ -0.32
NOTCH4-204ENST00000474612 LINC00526Q96FQ7 95 aa13.03□□□□□ -0.32
NOTCH4-204ENST00000474612 UPK3BQ9BT76 320 aa13.03□□□□□ -0.32
NOTCH4-204ENST00000474612 COX17Q14061 63 aa13.02□□□□□ -0.33
NOTCH4-204ENST00000474612 TCL1BO95988 128 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms