RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 HIST1H2BHQ93079 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BNQ99877 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BMQ99879 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 CDC42SE2Q9NRR3 84 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
CASC3-204ENST00000474190 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 TMEM262E9PQX1 116 aa6.9□□□□□ -1.3
CASC3-204ENST00000474190 K7EMI3 77 aa6.9□□□□□ -1.3
CASC3-204ENST00000474190 TTC32Q5I0X7 151 aa6.9□□□□□ -1.3
CASC3-204ENST00000474190 Q6ZUT4 128 aa6.9□□□□□ -1.3
CASC3-204ENST00000474190 LINC00269Q8N2A0 174 aa6.9□□□□□ -1.3
CASC3-204ENST00000474190 A0A087WX48 190 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 LINC00614P0C842 121 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 PMCHL1Q16048 86 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 TOMM6Q96B49 74 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
CASC3-204ENST00000474190 IGLV4-3A0A075B6K6 122 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 ANGP03950 147 aaKnown RBP6.88□□□□□ -1.31
CASC3-204ENST00000474190 ZNF25P17030 456 aaPredicted RBP6.88□□□□□ -1.31
CASC3-204ENST00000474190 BTF3P20290 206 aaKnown RBP6.88□□□□□ -1.31
CASC3-204ENST00000474190 MRPS36P82909 103 aaKnown RBP6.88□□□□□ -1.31
CASC3-204ENST00000474190 WFDC2Q14508 124 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 RNASE13Q5GAN3 156 aaKnown RBP6.88□□□□□ -1.31
CASC3-204ENST00000474190 ZC2HC1BQ5TFG8 222 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 CLPSL2Q6UWE3 100 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 C10orf126Q8N4M7 172 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
CASC3-204ENST00000474190 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 SERF1AO75920 110 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 PKIAP61925 76 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 REG3AQ06141 175 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 C1orf134Q5TEV5 83 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 RNASEKQ6P5S7 137 aaKnown RBP6.87□□□□□ -1.31
CASC3-204ENST00000474190 ZNF664Q8N3J9 261 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 AMELXQ99217 191 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 AP5S1Q9NUS5 200 aa6.87□□□□□ -1.31
CASC3-204ENST00000474190 TRAV9-2A0A087WT02 112 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 UBE2L6O14933 153 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 TNP2Q05952 138 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 COA6Q5JTJ3 125 aaKnown RBP6.86□□□□□ -1.31
CASC3-204ENST00000474190 FA2HQ7L5A8 372 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
CASC3-204ENST00000474190 Q9HAA7 133 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 CYSLTR1Q9Y271 337 aa6.86□□□□□ -1.31
CASC3-204ENST00000474190 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
CASC3-204ENST00000474190 LINC00959A0A1B0GUT2 108 aa6.85□□□□□ -1.31
CASC3-204ENST00000474190 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
CASC3-204ENST00000474190 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
CASC3-204ENST00000474190 TRAV8-3A0A0A6YYJ7 113 aa6.84□□□□□ -1.31
CASC3-204ENST00000474190 MIAQ16674 131 aa6.84□□□□□ -1.31
CASC3-204ENST00000474190 ERASQ7Z444 233 aa6.84□□□□□ -1.31
CASC3-204ENST00000474190 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
CASC3-204ENST00000474190 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 NPSP0C0P6 89 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 RAB5BP61020 215 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 FOXI1Q12951 378 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 FAM19A3Q7Z5A8 133 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 BAGE3Q86Y29 109 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 TMEM18Q96B42 140 aa6.83□□□□□ -1.32
CASC3-204ENST00000474190 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 HBDP02042 147 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 UBE2D1P51668 147 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 COX6A2Q02221 97 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 NFE4Q86UQ8 179 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
CASC3-204ENST00000474190 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
CASC3-204ENST00000474190 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
CASC3-204ENST00000474190 A0A087WTM6 91 aa6.81□□□□□ -1.32
CASC3-204ENST00000474190 TRAV8-4A0A0B4J246 113 aa6.81□□□□□ -1.32
CASC3-204ENST00000474190 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
CASC3-204ENST00000474190 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
CASC3-204ENST00000474190 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
CASC3-204ENST00000474190 SCGB3A1Q96QR1 104 aa6.81□□□□□ -1.32
CASC3-204ENST00000474190 TRAV13-1A0A0B4J241 112 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 IFITM10A6NMD0 228 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 C1orf196B1AJZ1 125 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 CCL25O15444 150 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 CRPP02741 224 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 DGAT2L7PQ6IED9 249 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 CST9LQ9H4G1 147 aa6.8□□□□□ -1.32
CASC3-204ENST00000474190 IGLV4-69A0A075B6H9 119 aa6.79□□□□□ -1.32
CASC3-204ENST00000474190 XCL1P47992 114 aa6.79□□□□□ -1.32
CASC3-204ENST00000474190 CD164L2Q6UWJ8 174 aa6.79□□□□□ -1.32
CASC3-204ENST00000474190 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms