RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FXYD7P58549 80 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 RPL19P84098 196 aaKnown RBP3.08□□□□□ -1.92
CCDC39-202ENST00000471307 PRR9Q5T870 116 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 FAM19A1Q7Z5A9 133 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 C11orf72Q8NBR9 251 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 BTF3L4Q96K17 158 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 LINC01587Q99440 93 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 TIMM17AQ99595 171 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 TMEM208Q9BTX3 173 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 NAT8BQ9UHF3 227 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 SMIM9A6NGZ8 99 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 HIGD1CA8MV81 97 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 KRTAP4-16G5E9R7 235 aaPredicted RBP3.07□□□□□ -1.92
CCDC39-202ENST00000471307 GNRH2O43555 120 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 IGLC6P0CF74 106 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 S100A4P26447 101 aaKnown RBP3.07□□□□□ -1.92
CCDC39-202ENST00000471307 ASIPP42127 132 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 ZFP2Q6ZN57 461 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 ZNF705AQ6ZN79 300 aaPredicted RBP3.07□□□□□ -1.92
CCDC39-202ENST00000471307 Q6ZQT7 251 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 FER1L6-AS1Q8NA97 138 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 NUP35Q8NFH5 326 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 BORCS7Q96B45 105 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 CAMK2N2Q96S95 79 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 DNAH3Q8TD57 4116 aa3.07□□□□□ -1.92
CCDC39-202ENST00000471307 TRBV24-1A0A075B6N3 115 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 TMSB15BA0A087X1C1 80 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 A0A1B0GUT8 65 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 GRIFINA4D1Z8 144 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 NDUFS5O43920 106 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 TYMSP04818 313 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 S100A8P05109 93 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 ARMS2P0C7Q2 107 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 GZMBP10144 247 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 HTN1P15515 57 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 ELOBQ15370 118 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 RBMY1FQ15415 496 aaKnown RBP3.06□□□□□ -1.92
CCDC39-202ENST00000471307 RRN3P1Q2M238 152 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 COX19Q49B96 90 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 DEFB121Q5J5C9 76 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 RASL11AQ6T310 242 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 LYZL1Q6UWQ5 148 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 PTH2Q96A98 100 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 YPEL4Q96NS1 127 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 CNFNQ9BYD5 112 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 TP53TG1Q9Y2A0 90 aa3.06□□□□□ -1.92
CCDC39-202ENST00000471307 MUC4Q99102 2169 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 COLCA2A8K830 154 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 K7EIL1 84 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 SCO1O75880 301 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 RNASE3P12724 160 aaKnown RBP3.05□□□□□ -1.92
CCDC39-202ENST00000471307 MIFP14174 115 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 NTF3P20783 257 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 CXCL5P42830 114 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 TCL1AP56279 114 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 PMVKQ15126 192 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 TMEM263Q8WUH6 116 aaKnown RBP3.05□□□□□ -1.92
CCDC39-202ENST00000471307 TMEM243Q9BU79 118 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 GNB1LQ9BYB4 327 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 PHLDA3Q9Y5J5 127 aa3.05□□□□□ -1.92
CCDC39-202ENST00000471307 TIMM8BQ9Y5J9 83 aaPredicted RBP3.05□□□□□ -1.92
CCDC39-202ENST00000471307 IGLV1-50A0A075B6I6 118 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 TGIF2-C20orf24A0A0A6YYL0 155 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 A0A1B0GXF2 115 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 PLAC8L1A1L4L8 177 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 H3BVH4 76 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 M0R2P5 195 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 SPINK4O60575 86 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 MT-ND6P03923 174 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 HBBP68871 147 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 DEFB135Q30KP9 77 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 LGALS9BQ3B8N2 356 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 C6orf99Q4VX62 202 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 SPANXN1Q5VSR9 72 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 SMIM15Q7Z3B0 74 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 ZFP82Q8N141 532 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 OR10AG1Q8NH19 301 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 FRZBQ92765 325 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 TMEM191AQ9H0A3 160 aa3.04□□□□□ -1.92
CCDC39-202ENST00000471307 MUC21A0A0G2JKD1 596 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 MUC21A0A140T8X8 626 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 A8MWV9 139 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 M0R381 172 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 HLA-DQA1P01909 254 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 PRM2P04554 102 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 SMIM17P0DL12 118 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 RAB4BP61018 213 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 MRPL54Q6P161 138 aaKnown RBP3.03□□□□□ -1.92
CCDC39-202ENST00000471307 TMEM136Q6ZRR5 245 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 SBSPONQ8IVN8 264 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 GATD1Q8NB37 220 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 B9D2Q9BPU9 175 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 TM2D3Q9BRN9 247 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms