RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 AMELXQ99217 191 aa12.89□□□□□ -0.35
MCF2L-221ENST00000469415 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
MCF2L-221ENST00000469415 LRRC75A-AS1Q8N1F1 130 aa12.88□□□□□ -0.35
MCF2L-221ENST00000469415 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
MCF2L-221ENST00000469415 TRAV13-1A0A0B4J241 112 aa12.88□□□□□ -0.35
MCF2L-221ENST00000469415 CHCHD7Q9BUK0 85 aa12.88□□□□□ -0.35
MCF2L-221ENST00000469415 GAGE7O76087 117 aa12.87□□□□□ -0.35
MCF2L-221ENST00000469415 GAGE12FP0CL80 117 aa12.87□□□□□ -0.35
MCF2L-221ENST00000469415 GAGE12GP0CL81 117 aa12.87□□□□□ -0.35
MCF2L-221ENST00000469415 GAGE12IP0CL82 117 aa12.87□□□□□ -0.35
MCF2L-221ENST00000469415 LINC00694P0DN24 101 aa12.87□□□□□ -0.35
MCF2L-221ENST00000469415 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
MCF2L-221ENST00000469415 OTOGQ6ZRI0 2925 aa12.86□□□□□ -0.35
MCF2L-221ENST00000469415 LEPROTO15243 131 aa12.86□□□□□ -0.35
MCF2L-221ENST00000469415 UBE2D1P51668 147 aa12.86□□□□□ -0.35
MCF2L-221ENST00000469415 LOC100131303A0A0U1RQF7 123 aa12.86□□□□□ -0.35
MCF2L-221ENST00000469415 SPANXB1Q9NS25 103 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-221ENST00000469415 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
MCF2L-221ENST00000469415 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
MCF2L-221ENST00000469415 UBE2D4Q9Y2X8 147 aa12.85□□□□□ -0.35
MCF2L-221ENST00000469415 NDUFA12Q9UI09 145 aa12.84□□□□□ -0.35
MCF2L-221ENST00000469415 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
MCF2L-221ENST00000469415 CFAP161Q6P656 301 aa12.84□□□□□ -0.35
MCF2L-221ENST00000469415 FLNBO75369 2602 aaKnown RBP12.84□□□□□ -0.35
MCF2L-221ENST00000469415 TCL1BO95988 128 aa12.83□□□□□ -0.35
MCF2L-221ENST00000469415 ADAMTSL4-AS1Q5T5F5 129 aa12.83□□□□□ -0.35
MCF2L-221ENST00000469415 F8W1H4 67 aa12.83□□□□□ -0.36
MCF2L-221ENST00000469415 EIF4EBP3O60516 100 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-221ENST00000469415 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-221ENST00000469415 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
MCF2L-221ENST00000469415 TENM1Q9UKZ4 2725 aa12.82□□□□□ -0.36
MCF2L-221ENST00000469415 COX6A2Q02221 97 aa12.82□□□□□ -0.36
MCF2L-221ENST00000469415 RNF183Q96D59 192 aa12.82□□□□□ -0.36
MCF2L-221ENST00000469415 SMCPP49901 116 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-221ENST00000469415 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
MCF2L-221ENST00000469415 PRO0461Q9UI25 63 aa12.8□□□□□ -0.36
MCF2L-221ENST00000469415 KRTAP1-1Q07627 177 aa12.79□□□□□ -0.36
MCF2L-221ENST00000469415 B5MCH6 92 aa12.79□□□□□ -0.36
MCF2L-221ENST00000469415 RS1O15537 224 aa12.79□□□□□ -0.36
MCF2L-221ENST00000469415 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
MCF2L-221ENST00000469415 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
MCF2L-221ENST00000469415 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
MCF2L-221ENST00000469415 A8MTW9 85 aa12.78□□□□□ -0.36
MCF2L-221ENST00000469415 ERG28Q9UKR5 140 aa12.78□□□□□ -0.36
MCF2L-221ENST00000469415 IGHV1-58A0A0C4DH39 117 aa12.77□□□□□ -0.36
MCF2L-221ENST00000469415 RPL36AP83881 106 aaKnown RBP12.77□□□□□ -0.36
MCF2L-221ENST00000469415 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.36
MCF2L-221ENST00000469415 C3orf56Q8N813 242 aa12.77□□□□□ -0.36
MCF2L-221ENST00000469415 RPL36ALQ969Q0 106 aaKnown RBP12.77□□□□□ -0.36
MCF2L-221ENST00000469415 FHL3Q13643 280 aa12.77□□□□□ -0.37
MCF2L-221ENST00000469415 PYGO1Q9Y3Y4 419 aa12.77□□□□□ -0.37
MCF2L-221ENST00000469415 C9JAW5 83 aa12.76□□□□□ -0.37
MCF2L-221ENST00000469415 VSIG2Q96IQ7 327 aa12.76□□□□□ -0.37
MCF2L-221ENST00000469415 A0A096LPF7 62 aa12.75□□□□□ -0.37
MCF2L-221ENST00000469415 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-221ENST00000469415 HERV-K104P63124 156 aa12.75□□□□□ -0.37
MCF2L-221ENST00000469415 BEAN1Q3B7T3 259 aa12.75□□□□□ -0.37
MCF2L-221ENST00000469415 TMEM86BQ8N661 226 aa12.75□□□□□ -0.37
MCF2L-221ENST00000469415 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
MCF2L-221ENST00000469415 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
MCF2L-221ENST00000469415 K7EQD1 137 aa12.74□□□□□ -0.37
MCF2L-221ENST00000469415 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
MCF2L-221ENST00000469415 ANK3Q12955 4377 aaKnown RBP12.74□□□□□ -0.37
MCF2L-221ENST00000469415 DEFB4AO15263 64 aa12.74□□□□□ -0.37
MCF2L-221ENST00000469415 GAGE6Q13070 117 aa12.74□□□□□ -0.37
MCF2L-221ENST00000469415 UBE2D3P61077 147 aa12.73□□□□□ -0.37
MCF2L-221ENST00000469415 UBE2D2P62837 147 aa12.73□□□□□ -0.37
MCF2L-221ENST00000469415 Q9H8V8 135 aa12.73□□□□□ -0.37
MCF2L-221ENST00000469415 TOMM7Q9P0U1 55 aa12.73□□□□□ -0.37
MCF2L-221ENST00000469415 SPATA3Q8NHX4 192 aa12.73□□□□□ -0.37
MCF2L-221ENST00000469415 TMEM263Q8WUH6 116 aaKnown RBP12.73□□□□□ -0.37
MCF2L-221ENST00000469415 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
MCF2L-221ENST00000469415 J3QR89 54 aa12.72□□□□□ -0.37
MCF2L-221ENST00000469415 PF4P02776 101 aa12.72□□□□□ -0.37
MCF2L-221ENST00000469415 SMIM20Q8N5G0 67 aa12.72□□□□□ -0.37
MCF2L-221ENST00000469415 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
MCF2L-221ENST00000469415 J3QKU1 62 aa12.72□□□□□ -0.37
MCF2L-221ENST00000469415 UBE2L6O14933 153 aa12.72□□□□□ -0.37
MCF2L-221ENST00000469415 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.37
MCF2L-221ENST00000469415 LINC00242Q5T6M2 205 aa12.71□□□□□ -0.37
MCF2L-221ENST00000469415 TEP1Q99973 2627 aaKnown RBP12.71□□□□□ -0.38
MCF2L-221ENST00000469415 TRAV25A0A0B4J276 109 aa12.7□□□□□ -0.38
MCF2L-221ENST00000469415 LITAFQ99732 161 aa12.7□□□□□ -0.38
MCF2L-221ENST00000469415 MEIG1Q5JSS6 88 aa12.7□□□□□ -0.38
MCF2L-221ENST00000469415 LINC00482Q8N8I6 264 aa12.7□□□□□ -0.38
MCF2L-221ENST00000469415 DNAJC30Q96LL9 226 aa12.7□□□□□ -0.38
MCF2L-221ENST00000469415 XGP55808 180 aa12.69□□□□□ -0.38
MCF2L-221ENST00000469415 FOXI1Q12951 378 aa12.69□□□□□ -0.38
MCF2L-221ENST00000469415 CLEC2BQ92478 149 aa12.69□□□□□ -0.38
MCF2L-221ENST00000469415 RNASE1P07998 156 aaKnown RBP12.69□□□□□ -0.38
MCF2L-221ENST00000469415 C11orf68Q9H3H3 251 aaKnown RBP12.69□□□□□ -0.38
MCF2L-221ENST00000469415 HIVEP1P15822 2718 aa12.68□□□□□ -0.38
MCF2L-221ENST00000469415 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
MCF2L-221ENST00000469415 TRRAPQ9Y4A5 3859 aa12.68□□□□□ -0.38
MCF2L-221ENST00000469415 TRIAP1O43715 76 aa12.68□□□□□ -0.38
MCF2L-221ENST00000469415 CLPSL2Q6UWE3 100 aa12.68□□□□□ -0.38
MCF2L-221ENST00000469415 ANKRD29Q8N6D5 301 aa12.68□□□□□ -0.38
MCF2L-221ENST00000469415 NSD1Q96L73 2696 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-221ENST00000469415 IGLV1-51P01701 117 aa12.67□□□□□ -0.38
MCF2L-221ENST00000469415 KRTAP10-3P60369 221 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms