RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SEC11AP67812 179 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 HSD52Q0P140 79 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 Q6ZUT4 128 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 PCP2Q8IVA1 136 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 OR5A1Q8NGJ0 315 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 C11orf68Q9H3H3 251 aaKnown RBP6.59□□□□□ -1.35
SMC1A-205ENST00000469129 VWFP04275 2813 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 LOC100131303A0A0U1RQF7 123 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 TINCRA0A1B0GVN0 87 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 PAX4O43316 350 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 GYPEP15421 78 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 HINT1P49773 126 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-205ENST00000469129 SH2D6Q7Z4S9 175 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 OPRPNQ99935 248 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-205ENST00000469129 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 MGAM2Q2M2H8 2515 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 NBEAL1Q6ZS30 2694 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 CMYA5Q8N3K9 4069 aa6.58□□□□□ -1.36
SMC1A-205ENST00000469129 TRAV26-1A0A087WT03 109 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 TRAV8-6A0A0B4J262 113 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 MYMXA0A1B0GTQ4 84 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 G3V4G9 280 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 H3BRM9 83 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-205ENST00000469129 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 CEMP1Q6PRD7 247 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-205ENST00000469129 NTM-AS1Q6ZSK4 140 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
SMC1A-205ENST00000469129 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
SMC1A-205ENST00000469129 A0A0J9YXV3 536 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 LEPROTO15243 131 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 DEFB4AO15263 64 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
SMC1A-205ENST00000469129 UBE2D1P51668 147 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 HERVK_113P63121 156 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 TAL2Q16559 108 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 FAM19A3Q7Z5A8 133 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 CELA1Q9UNI1 258 aa6.56□□□□□ -1.36
SMC1A-205ENST00000469129 A6NDN8 102 aa6.55□□□□□ -1.36
SMC1A-205ENST00000469129 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
SMC1A-205ENST00000469129 TIRAPP58753 221 aa6.55□□□□□ -1.36
SMC1A-205ENST00000469129 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
SMC1A-205ENST00000469129 BVES-AS1Q5T3Y7 98 aa6.55□□□□□ -1.36
SMC1A-205ENST00000469129 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
SMC1A-205ENST00000469129 ICOSQ9Y6W8 199 aa6.55□□□□□ -1.36
SMC1A-205ENST00000469129 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 F5H768 121 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 J3QQQ9 107 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 MRPL23Q16540 153 aaKnown RBP6.54□□□□□ -1.36
SMC1A-205ENST00000469129 SCGB1D4Q6XE38 83 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 LINC00469Q8N7U9 141 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 ORAOV1Q8WV07 137 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 PKD1L1Q8TDX9 2849 aa6.54□□□□□ -1.36
SMC1A-205ENST00000469129 GAGE6Q13070 117 aa6.53□□□□□ -1.36
SMC1A-205ENST00000469129 TTTY13Q9BZ97 58 aa6.53□□□□□ -1.36
SMC1A-205ENST00000469129 IGHV1-58A0A0C4DH39 117 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 A0A0J9YY99 117 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 A0A1B0GV90 55 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 H3BNG1 76 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 HTN3P15516 51 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 KPRPQ5T749 579 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-205ENST00000469129 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 HIST1H4GQ99525 98 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 RETNQ9HD89 108 aa6.52□□□□□ -1.37
SMC1A-205ENST00000469129 A0A1B0GUV1 79 aa6.51□□□□□ -1.37
SMC1A-205ENST00000469129 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
SMC1A-205ENST00000469129 A6NJY4 79 aa6.51□□□□□ -1.37
SMC1A-205ENST00000469129 IGHV3-30-3P0DP02 117 aa6.51□□□□□ -1.37
SMC1A-205ENST00000469129 GCSHP23434 173 aa6.51□□□□□ -1.37
SMC1A-205ENST00000469129 CEND1Q8N111 149 aa6.51□□□□□ -1.37
SMC1A-205ENST00000469129 SPANXB1Q9NS25 103 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-205ENST00000469129 TRAV13-1A0A0B4J241 112 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 CCL25O15444 150 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 PTTG1IPP53801 180 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 TSPEAR-AS2P59090 65 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 C12orf74Q32Q52 190 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 LINC00242Q5T6M2 205 aa6.5□□□□□ -1.37
SMC1A-205ENST00000469129 IGHV3-64A0A075B6Q5 118 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 SPINK8P0C7L1 97 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 LELP1Q5T871 98 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 ZFAND6Q6FIF0 208 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 TM2D3Q9BRN9 247 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 TM2D2Q9BX73 214 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 CDKN2A-AS1Q9UH64 79 aa6.49□□□□□ -1.37
SMC1A-205ENST00000469129 A0A096LPF7 62 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 A0A0J9YWU9 116 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 K7EIL1 84 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMC1A-205ENST00000469129 SS18Q15532 418 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms