RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
COL5A1-205ENST00000464187 K7EP34 96 aa10.32□□□□□ -0.76
COL5A1-205ENST00000464187 PRB2P02812 416 aaPredicted RBP10.32□□□□□ -0.76
COL5A1-205ENST00000464187 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
COL5A1-205ENST00000464187 NBEAL1Q6ZS30 2694 aa10.32□□□□□ -0.76
COL5A1-205ENST00000464187 CRYBA4P53673 196 aa10.31□□□□□ -0.76
COL5A1-205ENST00000464187 COTL1Q14019 142 aa10.31□□□□□ -0.76
COL5A1-205ENST00000464187 C12orf74Q32Q52 190 aa10.31□□□□□ -0.76
COL5A1-205ENST00000464187 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
COL5A1-205ENST00000464187 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 A0A0J9YY99 117 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 J3QQQ9 107 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 RNASE13Q5GAN3 156 aaKnown RBP10.3□□□□□ -0.76
COL5A1-205ENST00000464187 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
COL5A1-205ENST00000464187 GTF2H5Q6ZYL4 71 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 RNF183Q96D59 192 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 LEPROTO15243 131 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 OR5A1Q8NGJ0 315 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 OVOL2Q9BRP0 275 aa10.3□□□□□ -0.76
COL5A1-205ENST00000464187 K7EQD1 137 aa10.29□□□□□ -0.76
COL5A1-205ENST00000464187 MRPS36P82909 103 aaKnown RBP10.29□□□□□ -0.76
COL5A1-205ENST00000464187 Q6ZUT4 128 aa10.29□□□□□ -0.76
COL5A1-205ENST00000464187 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
COL5A1-205ENST00000464187 FABP2P12104 132 aa10.28□□□□□ -0.76
COL5A1-205ENST00000464187 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
COL5A1-205ENST00000464187 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
COL5A1-205ENST00000464187 IGHV3-64A0A075B6Q5 118 aa10.28□□□□□ -0.76
COL5A1-205ENST00000464187 IGLL5B9A064 214 aa10.28□□□□□ -0.76
COL5A1-205ENST00000464187 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 K7EIL1 84 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE7O76087 117 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 MIFP14174 115 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
COL5A1-205ENST00000464187 KRTAP21-3Q3LHN1 58 aa10.27□□□□□ -0.77
COL5A1-205ENST00000464187 SPANXB1Q9NS25 103 aaPredicted RBP10.27□□□□□ -0.77
COL5A1-205ENST00000464187 IGHV4-28A0A0C4DH34 117 aa10.26□□□□□ -0.77
COL5A1-205ENST00000464187 TRBV10-1A0A0K0K1A3 114 aa10.26□□□□□ -0.77
COL5A1-205ENST00000464187 DEFB4AO15263 64 aa10.26□□□□□ -0.77
COL5A1-205ENST00000464187 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
COL5A1-205ENST00000464187 RPL36AP83881 106 aaKnown RBP10.26□□□□□ -0.77
COL5A1-205ENST00000464187 SLC25A29Q8N8R3 303 aa10.26□□□□□ -0.77
COL5A1-205ENST00000464187 Q8NAQ8 132 aa10.26□□□□□ -0.77
COL5A1-205ENST00000464187 RPL36ALQ969Q0 106 aaKnown RBP10.26□□□□□ -0.77
COL5A1-205ENST00000464187 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
COL5A1-205ENST00000464187 RETNQ9HD89 108 aa10.25□□□□□ -0.77
COL5A1-205ENST00000464187 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 A6NJY4 79 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 UBE2D1P51668 147 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 UBE2D3P61077 147 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 UBE2D2P62837 147 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 DEFB121Q5J5C9 76 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 TIMM21Q9BVV7 248 aa10.24□□□□□ -0.77
COL5A1-205ENST00000464187 IGHV3-30P01768 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 IGHV3-30-5P0DP03 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 DEFB130BP0DP73 79 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 DEFB130AP0DP74 79 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 FAM222AQ5U5X8 452 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 IGHV3-30-3P0DP02 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE4Q13068 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE5Q13069 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 GAGE13Q4V321 117 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
COL5A1-205ENST00000464187 SBSPONQ8IVN8 264 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 LINC00612Q8N6U2 182 aa10.23□□□□□ -0.77
COL5A1-205ENST00000464187 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
COL5A1-205ENST00000464187 LYRM9A8MSI8 78 aa10.22□□□□□ -0.77
COL5A1-205ENST00000464187 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
COL5A1-205ENST00000464187 C10orf126Q8N4M7 172 aa10.22□□□□□ -0.77
COL5A1-205ENST00000464187 IGHV1-58A0A0C4DH39 117 aa10.21□□□□□ -0.78
COL5A1-205ENST00000464187 LOC100131303A0A0U1RQF7 123 aa10.2□□□□□ -0.78
COL5A1-205ENST00000464187 CIDEAO60543 219 aa10.2□□□□□ -0.78
COL5A1-205ENST00000464187 SPINK8P0C7L1 97 aa10.2□□□□□ -0.78
COL5A1-205ENST00000464187 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
COL5A1-205ENST00000464187 MRAPQ8TCY5 172 aa10.2□□□□□ -0.78
COL5A1-205ENST00000464187 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
COL5A1-205ENST00000464187 A0A0J9YXY3 114 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 OCIAD2Q56VL3 154 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 VSIG2Q96IQ7 327 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 CELA1Q9UNI1 258 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 IGLV5-45A0A087WSX0 123 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 APOMO95445 188 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 TIRAPP58753 221 aa10.19□□□□□ -0.78
COL5A1-205ENST00000464187 GEMIN7Q9H840 131 aaKnown RBP10.19□□□□□ -0.78
COL5A1-205ENST00000464187 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
COL5A1-205ENST00000464187 TSPAN13O95857 204 aa10.18□□□□□ -0.78
COL5A1-205ENST00000464187 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
COL5A1-205ENST00000464187 RBX1P62877 108 aa10.18□□□□□ -0.78
COL5A1-205ENST00000464187 CSDC2Q9Y534 153 aaKnown RBP10.18□□□□□ -0.78
COL5A1-205ENST00000464187 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 CFC1P0CG37 223 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 DAD1P61803 113 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 COX6A2Q02221 97 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms