RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 NHP2Q9NX24 153 aaKnown RBP13.85□□□□□ -0.19
FAM3A-215ENST00000447601 FHL2Q14192 279 aa13.84□□□□□ -0.19
FAM3A-215ENST00000447601 AMMECR1LQ6DCA0 310 aa13.84□□□□□ -0.19
FAM3A-215ENST00000447601 LINC00612Q8N6U2 182 aa13.84□□□□□ -0.19
FAM3A-215ENST00000447601 CSDC2Q9Y534 153 aaKnown RBP13.84□□□□□ -0.19
FAM3A-215ENST00000447601 A0A0J9YY99 117 aa13.83□□□□□ -0.2
FAM3A-215ENST00000447601 H3BUT2 72 aa13.83□□□□□ -0.2
FAM3A-215ENST00000447601 WIPF1O43516 503 aa13.83□□□□□ -0.2
FAM3A-215ENST00000447601 UBE2D1P51668 147 aa13.83□□□□□ -0.2
FAM3A-215ENST00000447601 SBSPONQ8IVN8 264 aa13.83□□□□□ -0.2
FAM3A-215ENST00000447601 DEFB130BP0DP73 79 aa13.82□□□□□ -0.2
FAM3A-215ENST00000447601 DEFB130AP0DP74 79 aa13.82□□□□□ -0.2
FAM3A-215ENST00000447601 SRSF9Q13242 221 aaKnown RBP eCLIP13.82□□□□□ -0.2
FAM3A-215ENST00000447601 LOC100131303A0A0U1RQF7 123 aa13.81□□□□□ -0.2
FAM3A-215ENST00000447601 LINC00694P0DN24 101 aa13.81□□□□□ -0.2
FAM3A-215ENST00000447601 TMEM243Q9BU79 118 aa13.81□□□□□ -0.2
FAM3A-215ENST00000447601 GEMIN7Q9H840 131 aaKnown RBP13.81□□□□□ -0.2
FAM3A-215ENST00000447601 IGHV3-64A0A075B6Q5 118 aa13.8□□□□□ -0.2
FAM3A-215ENST00000447601 SPANXB1Q9NS25 103 aaPredicted RBP13.8□□□□□ -0.2
FAM3A-215ENST00000447601 TMEM238LA0A1B0GVL6 79 aa13.8□□□□□ -0.2
FAM3A-215ENST00000447601 A6NJY4 79 aa13.8□□□□□ -0.2
FAM3A-215ENST00000447601 K7ERJ3 54 aa13.8□□□□□ -0.2
FAM3A-215ENST00000447601 TIRAPP58753 221 aa13.8□□□□□ -0.2
FAM3A-215ENST00000447601 OR5A1Q8NGJ0 315 aa13.8□□□□□ -0.2
FAM3A-215ENST00000447601 H7C423 109 aa13.79□□□□□ -0.2
FAM3A-215ENST00000447601 UBE2L6O14933 153 aa13.79□□□□□ -0.2
FAM3A-215ENST00000447601 IGHV3-30-3P0DP02 117 aa13.79□□□□□ -0.2
FAM3A-215ENST00000447601 IGHV1-58A0A0C4DH39 117 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 LYRM9A8MSI8 78 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 C12orf74Q32Q52 190 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 A0A1W2PPM0 123 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 DEFB135Q30KP9 77 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
FAM3A-215ENST00000447601 IGLV5-45A0A087WSX0 123 aa13.77□□□□□ -0.21
FAM3A-215ENST00000447601 SAMD5Q5TGI4 173 aa13.77□□□□□ -0.21
FAM3A-215ENST00000447601 GTF2H5Q6ZYL4 71 aa13.77□□□□□ -0.21
FAM3A-215ENST00000447601 NAA38Q9BRA0 125 aaKnown RBP13.77□□□□□ -0.21
FAM3A-215ENST00000447601 NOTCH3Q9UM47 2321 aa13.77□□□□□ -0.21
FAM3A-215ENST00000447601 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
FAM3A-215ENST00000447601 HERVK_113P63121 156 aa13.76□□□□□ -0.21
FAM3A-215ENST00000447601 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
FAM3A-215ENST00000447601 VSIG2Q96IQ7 327 aa13.76□□□□□ -0.21
FAM3A-215ENST00000447601 CDC42SE2Q9NRR3 84 aa13.76□□□□□ -0.21
FAM3A-215ENST00000447601 TRAV8-3A0A0A6YYJ7 113 aa13.75□□□□□ -0.21
FAM3A-215ENST00000447601 FABP2P12104 132 aa13.75□□□□□ -0.21
FAM3A-215ENST00000447601 FAM222AQ5U5X8 452 aa13.75□□□□□ -0.21
FAM3A-215ENST00000447601 TRBV6-8A0A0A6YYG3 113 aa13.74□□□□□ -0.21
FAM3A-215ENST00000447601 K7EP34 96 aa13.74□□□□□ -0.21
FAM3A-215ENST00000447601 SPINK8P0C7L1 97 aa13.74□□□□□ -0.21
FAM3A-215ENST00000447601 CDKN2A-AS1Q9UH64 79 aa13.74□□□□□ -0.21
FAM3A-215ENST00000447601 TENM1Q9UKZ4 2725 aa13.73□□□□□ -0.21
FAM3A-215ENST00000447601 VWFP04275 2813 aa13.73□□□□□ -0.21
FAM3A-215ENST00000447601 IGHV3-30P01768 117 aa13.73□□□□□ -0.21
FAM3A-215ENST00000447601 IGHV3-30-5P0DP03 117 aa13.73□□□□□ -0.21
FAM3A-215ENST00000447601 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
FAM3A-215ENST00000447601 IGLL5B9A064 214 aa13.72□□□□□ -0.21
FAM3A-215ENST00000447601 TMEM238C9JI98 176 aa13.72□□□□□ -0.21
FAM3A-215ENST00000447601 IGHV4-30-4P0DP06 118 aa13.72□□□□□ -0.21
FAM3A-215ENST00000447601 KRTAP24-1Q3LI83 254 aa13.72□□□□□ -0.21
FAM3A-215ENST00000447601 C10orf126Q8N4M7 172 aa13.72□□□□□ -0.21
FAM3A-215ENST00000447601 PRO0255Q9UI72 69 aa13.72□□□□□ -0.21
FAM3A-215ENST00000447601 IGHV4-28A0A0C4DH34 117 aa13.71□□□□□ -0.21
FAM3A-215ENST00000447601 MIFP14174 115 aa13.71□□□□□ -0.21
FAM3A-215ENST00000447601 SPCS1Q9Y6A9 102 aa13.71□□□□□ -0.21
FAM3A-215ENST00000447601 F8P00451 2351 aa13.71□□□□□ -0.21
FAM3A-215ENST00000447601 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.22
FAM3A-215ENST00000447601 A0A0J9YXY3 114 aa13.71□□□□□ -0.22
FAM3A-215ENST00000447601 GYPEP15421 78 aa13.71□□□□□ -0.22
FAM3A-215ENST00000447601 NDUFA12Q9UI09 145 aa13.71□□□□□ -0.22
FAM3A-215ENST00000447601 ATRQ13535 2644 aa13.7□□□□□ -0.22
FAM3A-215ENST00000447601 TEP1Q99973 2627 aaKnown RBP13.7□□□□□ -0.22
FAM3A-215ENST00000447601 COX6A2Q02221 97 aa13.69□□□□□ -0.22
FAM3A-215ENST00000447601 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
FAM3A-215ENST00000447601 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
FAM3A-215ENST00000447601 GAGE6Q13070 117 aa13.69□□□□□ -0.22
FAM3A-215ENST00000447601 RNF183Q96D59 192 aa13.69□□□□□ -0.22
FAM3A-215ENST00000447601 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
FAM3A-215ENST00000447601 Q8NAQ8 132 aa13.68□□□□□ -0.22
FAM3A-215ENST00000447601 IGLV5-39A0A0G2JS06 123 aa13.67□□□□□ -0.22
FAM3A-215ENST00000447601 DEFB4AO15263 64 aa13.67□□□□□ -0.22
FAM3A-215ENST00000447601 PAX4O43316 350 aa13.67□□□□□ -0.22
FAM3A-215ENST00000447601 DAD1P61803 113 aa13.67□□□□□ -0.22
FAM3A-215ENST00000447601 C3orf56Q8N813 242 aa13.67□□□□□ -0.22
FAM3A-215ENST00000447601 A8MZ25 164 aa13.65□□□□□ -0.22
FAM3A-215ENST00000447601 RPL24P83731 157 aaKnown RBP13.65□□□□□ -0.22
FAM3A-215ENST00000447601 SHISA2Q6UWI4 295 aa13.65□□□□□ -0.22
FAM3A-215ENST00000447601 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 PGPEP1Q9NXJ5 209 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 SMIM1B2RUZ4 78 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 NDUFA1O15239 70 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 APOMO95445 188 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 LITAFQ99732 161 aa13.64□□□□□ -0.23
FAM3A-215ENST00000447601 SPART-AS1P0CW21 52 aa13.63□□□□□ -0.23
FAM3A-215ENST00000447601 IGLV4-60A0A075B6I1 120 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 TIMM17BO60830 172 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 ATP5G1P05496 136 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 CFC1BP0CG36 223 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 CFC1P0CG37 223 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms