RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
HOXC4-202ENST00000430889 TMEM238LA0A1B0GVL6 79 aa9.91□□□□□ -0.82
HOXC4-202ENST00000430889 A6NJY4 79 aa9.91□□□□□ -0.82
HOXC4-202ENST00000430889 PF4P02776 101 aa9.91□□□□□ -0.82
HOXC4-202ENST00000430889 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
HOXC4-202ENST00000430889 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
HOXC4-202ENST00000430889 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
HOXC4-202ENST00000430889 TIRAPP58753 221 aa9.9□□□□□ -0.82
HOXC4-202ENST00000430889 SPATA3Q8NHX4 192 aa9.9□□□□□ -0.82
HOXC4-202ENST00000430889 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
HOXC4-202ENST00000430889 NSD1Q96L73 2696 aaPredicted RBP9.9□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE7O76087 117 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE12FP0CL80 117 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE12GP0CL81 117 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE12IP0CL82 117 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 RBX1P62877 108 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 LINC00612Q8N6U2 182 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.83
HOXC4-202ENST00000430889 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
HOXC4-202ENST00000430889 TRAV8-3A0A0A6YYJ7 113 aa9.89□□□□□ -0.83
HOXC4-202ENST00000430889 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
HOXC4-202ENST00000430889 LITAFQ99732 161 aa9.89□□□□□ -0.83
HOXC4-202ENST00000430889 FN1P02751 2386 aaKnown RBP9.88□□□□□ -0.83
HOXC4-202ENST00000430889 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 INSL3P51460 131 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE4Q13068 117 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE5Q13069 117 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 GAGE13Q4V321 117 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 OCIAD2Q56VL3 154 aa9.88□□□□□ -0.83
HOXC4-202ENST00000430889 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.88□□□□□ -0.83
HOXC4-202ENST00000430889 C2CD3Q4AC94 2353 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 CFC1BP0CG36 223 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 CFC1P0CG37 223 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 FHL2Q14192 279 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
HOXC4-202ENST00000430889 FOSL1P15407 271 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
HOXC4-202ENST00000430889 LOC100131303A0A0U1RQF7 123 aa9.86□□□□□ -0.83
HOXC4-202ENST00000430889 TSPAN13O95857 204 aa9.86□□□□□ -0.83
HOXC4-202ENST00000430889 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
HOXC4-202ENST00000430889 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
HOXC4-202ENST00000430889 X6R8D5 127 aa9.86□□□□□ -0.83
HOXC4-202ENST00000430889 IGLV5-39A0A0G2JS06 123 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 COX6A2Q02221 97 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 C9orf66Q5T8R8 295 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 ZFAND6Q6FIF0 208 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 CITED1Q99966 193 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 CDC42SE2Q9NRR3 84 aa9.85□□□□□ -0.83
HOXC4-202ENST00000430889 VWFP04275 2813 aa9.84□□□□□ -0.83
HOXC4-202ENST00000430889 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
HOXC4-202ENST00000430889 CRLF1O75462 422 aa9.84□□□□□ -0.83
HOXC4-202ENST00000430889 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
HOXC4-202ENST00000430889 H7C423 109 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 DGAT2L7PQ6IED9 249 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 TMEM243Q9BU79 118 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 SPANXDQ9BXN6 97 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 SPANXCQ9NY87 97 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 PRO0461Q9UI25 63 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 A8MZ25 164 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 APOMO95445 188 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 HERVK_113P63121 156 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 TMEM101Q96IK0 257 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 HIVEP1P15822 2718 aa9.83□□□□□ -0.84
HOXC4-202ENST00000430889 TRGV4A0A0C4DH28 118 aa9.82□□□□□ -0.84
HOXC4-202ENST00000430889 A4D1N5 150 aa9.82□□□□□ -0.84
HOXC4-202ENST00000430889 SMIM9A6NGZ8 99 aa9.82□□□□□ -0.84
HOXC4-202ENST00000430889 A0A0B4J2C4 111 aa9.81□□□□□ -0.84
HOXC4-202ENST00000430889 NDUFA1O15239 70 aa9.81□□□□□ -0.84
HOXC4-202ENST00000430889 TIMM17BO60830 172 aa9.81□□□□□ -0.84
HOXC4-202ENST00000430889 ADAMTSL4-AS1Q5T5F5 129 aa9.81□□□□□ -0.84
HOXC4-202ENST00000430889 F5H768 121 aa9.8□□□□□ -0.84
HOXC4-202ENST00000430889 H3BMG7 143 aa9.8□□□□□ -0.84
HOXC4-202ENST00000430889 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
HOXC4-202ENST00000430889 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
HOXC4-202ENST00000430889 F8W1H4 67 aa9.8□□□□□ -0.84
HOXC4-202ENST00000430889 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
HOXC4-202ENST00000430889 K7ERU9 68 aa9.79□□□□□ -0.84
HOXC4-202ENST00000430889 WIPF1O43516 503 aa9.79□□□□□ -0.84
HOXC4-202ENST00000430889 IGHV3-33P01772 117 aa9.79□□□□□ -0.84
HOXC4-202ENST00000430889 MIAQ16674 131 aa9.79□□□□□ -0.84
HOXC4-202ENST00000430889 TENM1Q9UKZ4 2725 aa9.78□□□□□ -0.84
HOXC4-202ENST00000430889 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
HOXC4-202ENST00000430889 RNF183Q96D59 192 aa9.78□□□□□ -0.84
HOXC4-202ENST00000430889 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.77□□□□□ -0.84
HOXC4-202ENST00000430889 WFDC2Q14508 124 aa9.77□□□□□ -0.84
HOXC4-202ENST00000430889 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.84
HOXC4-202ENST00000430889 TRAV13-1A0A0B4J241 112 aa9.77□□□□□ -0.85
HOXC4-202ENST00000430889 G3V4G9 280 aa9.77□□□□□ -0.85
HOXC4-202ENST00000430889 UBE2L6O14933 153 aa9.77□□□□□ -0.85
HOXC4-202ENST00000430889 CBY1Q9Y3M2 126 aa9.77□□□□□ -0.85
HOXC4-202ENST00000430889 DEFB130BP0DP73 79 aa9.76□□□□□ -0.85
HOXC4-202ENST00000430889 DEFB130AP0DP74 79 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms