RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.82
APOBEC3D-202ENST00000427494 TRGV4A0A0C4DH28 118 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 K7EP34 96 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 CIDEAO60543 219 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 CITED1Q99966 193 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 FABP2P12104 132 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
APOBEC3D-202ENST00000427494 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 TMEM238LA0A1B0GVL6 79 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 A6NJY4 79 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 UBE2D1P51668 147 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 SPCS1Q9Y6A9 102 aa9.94□□□□□ -0.82
APOBEC3D-202ENST00000427494 HIVEP1P15822 2718 aa9.93□□□□□ -0.82
APOBEC3D-202ENST00000427494 NOTCH3Q9UM47 2321 aa9.93□□□□□ -0.82
APOBEC3D-202ENST00000427494 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
APOBEC3D-202ENST00000427494 IGLL5B9A064 214 aa9.93□□□□□ -0.82
APOBEC3D-202ENST00000427494 IGHV3-30-3P0DP02 117 aa9.93□□□□□ -0.82
APOBEC3D-202ENST00000427494 GEMIN7Q9H840 131 aaKnown RBP9.93□□□□□ -0.82
APOBEC3D-202ENST00000427494 TRAV8-3A0A0A6YYJ7 113 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 FHL2Q14192 279 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 SBSPONQ8IVN8 264 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 IGHV1-58A0A0C4DH39 117 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 GTSF1LQ9H1H1 148 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 X6R8D5 127 aa9.92□□□□□ -0.82
APOBEC3D-202ENST00000427494 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
APOBEC3D-202ENST00000427494 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
APOBEC3D-202ENST00000427494 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
APOBEC3D-202ENST00000427494 UBE2L6O14933 153 aa9.9□□□□□ -0.82
APOBEC3D-202ENST00000427494 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
APOBEC3D-202ENST00000427494 KIR2DL5BQ8NHK3 375 aa9.9□□□□□ -0.82
APOBEC3D-202ENST00000427494 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.82
APOBEC3D-202ENST00000427494 TIRAPP58753 221 aa9.9□□□□□ -0.83
APOBEC3D-202ENST00000427494 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.83
APOBEC3D-202ENST00000427494 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.83
APOBEC3D-202ENST00000427494 SMIM9A6NGZ8 99 aa9.89□□□□□ -0.83
APOBEC3D-202ENST00000427494 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 IGLV5-45A0A087WSX0 123 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 APOMO95445 188 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 COX6A2Q02221 97 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
APOBEC3D-202ENST00000427494 VWFP04275 2813 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 A8MZ25 164 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 HERVK_113P63121 156 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 DEFB135Q30KP9 77 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 LINC00242Q5T6M2 205 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
APOBEC3D-202ENST00000427494 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
APOBEC3D-202ENST00000427494 APOC4P55056 127 aa9.86□□□□□ -0.83
APOBEC3D-202ENST00000427494 TENM1Q9UKZ4 2725 aa9.86□□□□□ -0.83
APOBEC3D-202ENST00000427494 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
APOBEC3D-202ENST00000427494 H7C423 109 aa9.85□□□□□ -0.83
APOBEC3D-202ENST00000427494 GAGE6Q13070 117 aa9.85□□□□□ -0.83
APOBEC3D-202ENST00000427494 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 CFC1P0CG37 223 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 WFDC9Q8NEX5 89 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
APOBEC3D-202ENST00000427494 LYRM9A8MSI8 78 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 TSPAN13O95857 204 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 RPL24P83731 157 aaKnown RBP9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 LITAFQ99732 161 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 A4D1N5 150 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 DEFB4AO15263 64 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 GYPEP15421 78 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
APOBEC3D-202ENST00000427494 TEP1Q99973 2627 aaKnown RBP9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 IGHV4-28A0A0C4DH34 117 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 IGLV5-39A0A0G2JS06 123 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 NDUFA1O15239 70 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 ATP6V0E2Q8NHE4 81 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 SMIM1B2RUZ4 78 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 WIPF1O43516 503 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 PRO0255Q9UI72 69 aa9.81□□□□□ -0.84
APOBEC3D-202ENST00000427494 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
APOBEC3D-202ENST00000427494 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
APOBEC3D-202ENST00000427494 ATRQ13535 2644 aa9.8□□□□□ -0.84
APOBEC3D-202ENST00000427494 IGLV4-60A0A075B6I1 120 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 H3BMG7 143 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 PRSS2P07478 247 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 IGHV4-30-4P0DP06 118 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 PRO1854Q9UHT4 67 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms