RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 H3BRM9 83 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 EREGO14944 169 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 PAX4O43316 350 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
HMGB4-201ENST00000425537 KRTAP10-11P60412 298 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 TAL2Q16559 108 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 Q8NAQ8 132 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 OR5A1Q8NGJ0 315 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 ATP6V0E2Q8NHE4 81 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 PLEKHB2Q96CS7 222 aa6.69□□□□□ -1.34
HMGB4-201ENST00000425537 GEMIN7Q9H840 131 aaKnown RBP6.69□□□□□ -1.34
HMGB4-201ENST00000425537 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 TRAV8-6A0A0B4J262 113 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 MYMXA0A1B0GTQ4 84 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 A6NDN8 102 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 SAMD5Q5TGI4 173 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 Q9UF83 564 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 TRRAPQ9Y4A5 3859 aa6.68□□□□□ -1.34
HMGB4-201ENST00000425537 TRAV26-1A0A087WT03 109 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 LEPROTO15243 131 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 LINC00694P0DN24 101 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 GYPEP15421 78 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 LGALS3P17931 250 aaKnown RBP6.67□□□□□ -1.34
HMGB4-201ENST00000425537 TIRAPP58753 221 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 MPV17L2Q567V2 206 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 C2orf91Q6ZV80 131 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 SBSPONQ8IVN8 264 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
HMGB4-201ENST00000425537 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
HMGB4-201ENST00000425537 NOTCH3Q9UM47 2321 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 A0A0J9YXV3 536 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 ZNF815PA8K554 130 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 TCTAP57738 103 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 HERVK_113P63121 156 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 BVES-AS1Q5T3Y7 98 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 Q6ZUT4 128 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
HMGB4-201ENST00000425537 C11orf68Q9H3H3 251 aaKnown RBP6.66□□□□□ -1.34
HMGB4-201ENST00000425537 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
HMGB4-201ENST00000425537 MRPL23Q16540 153 aaKnown RBP6.65□□□□□ -1.34
HMGB4-201ENST00000425537 SCGB1D4Q6XE38 83 aa6.65□□□□□ -1.34
HMGB4-201ENST00000425537 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.34
HMGB4-201ENST00000425537 LOC100131303A0A0U1RQF7 123 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 F5H768 121 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 J3QQQ9 107 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 UBE2D1P51668 147 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 CEMP1Q6PRD7 247 aaPredicted RBP6.64□□□□□ -1.35
HMGB4-201ENST00000425537 LINC00469Q8N7U9 141 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 NBEAL1Q6ZS30 2694 aa6.64□□□□□ -1.35
HMGB4-201ENST00000425537 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
HMGB4-201ENST00000425537 A6NJY4 79 aa6.63□□□□□ -1.35
HMGB4-201ENST00000425537 H3BNG1 76 aa6.63□□□□□ -1.35
HMGB4-201ENST00000425537 DEFB4AO15263 64 aa6.63□□□□□ -1.35
HMGB4-201ENST00000425537 CCL25O15444 150 aa6.63□□□□□ -1.35
HMGB4-201ENST00000425537 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 A0A1B0GUV1 79 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 GAGE6Q13070 117 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 FAM104AQ969W3 186 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
HMGB4-201ENST00000425537 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 A0A1B0GV90 55 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 K7EIL1 84 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 GCSHP23434 173 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 SRSF9Q13242 221 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB4-201ENST00000425537 RNASE13Q5GAN3 156 aaKnown RBP6.61□□□□□ -1.35
HMGB4-201ENST00000425537 CEND1Q8N111 149 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 MAPKAPK5-AS1Q8N8E1 139 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
HMGB4-201ENST00000425537 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
HMGB4-201ENST00000425537 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 TMEM238C9JI98 176 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 TMEM262E9PQX1 116 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 SMIM13P0DJ93 91 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 IGHV3-30-3P0DP02 117 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 HTN3P15516 51 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 DEFB121Q5J5C9 76 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 KPRPQ5T749 579 aaPredicted RBP6.6□□□□□ -1.35
HMGB4-201ENST00000425537 MRAPQ8TCY5 172 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 TTTY13Q9BZ97 58 aa6.6□□□□□ -1.35
HMGB4-201ENST00000425537 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
HMGB4-201ENST00000425537 A0A0J9YY99 117 aa6.59□□□□□ -1.35
HMGB4-201ENST00000425537 SS18Q15532 418 aa6.59□□□□□ -1.35
HMGB4-201ENST00000425537 LINC00242Q5T6M2 205 aa6.59□□□□□ -1.35
HMGB4-201ENST00000425537 Q6ZVH6 145 aa6.59□□□□□ -1.35
HMGB4-201ENST00000425537 COPS9Q8WXC6 57 aa6.59□□□□□ -1.35
HMGB4-201ENST00000425537 COX11Q9Y6N1 276 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms