RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 Q6ZQT7 251 aa10.87□□□□□ -0.67
SEMA4D-204ENST00000420101 H7C423 109 aa10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 EIF4EBP3O60516 100 aaPredicted RBP10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 PROK1P58294 105 aa10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 DNAJC30Q96LL9 226 aa10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 LST1O00453 97 aa10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 TRIAP1O43715 76 aa10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 RNASE3P12724 160 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-204ENST00000420101 A0A0J9YXY3 114 aa10.85□□□□□ -0.67
SEMA4D-204ENST00000420101 K7EQG2 157 aa10.85□□□□□ -0.67
SEMA4D-204ENST00000420101 RNASE4P34096 147 aaKnown RBP10.85□□□□□ -0.67
SEMA4D-204ENST00000420101 LINC01587Q99440 93 aa10.85□□□□□ -0.67
SEMA4D-204ENST00000420101 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
SEMA4D-204ENST00000420101 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
SEMA4D-204ENST00000420101 UQCRQO14949 82 aa10.84□□□□□ -0.67
SEMA4D-204ENST00000420101 TIMM17BO60830 172 aa10.84□□□□□ -0.67
SEMA4D-204ENST00000420101 ZNF56Q15929 161 aa10.84□□□□□ -0.67
SEMA4D-204ENST00000420101 CXCL5P42830 114 aa10.83□□□□□ -0.68
SEMA4D-204ENST00000420101 MTORP42345 2549 aa10.83□□□□□ -0.68
SEMA4D-204ENST00000420101 A0A1B0GX51 115 aa10.82□□□□□ -0.68
SEMA4D-204ENST00000420101 H7C2G1 150 aa10.82□□□□□ -0.68
SEMA4D-204ENST00000420101 EMP1P54849 157 aa10.82□□□□□ -0.68
SEMA4D-204ENST00000420101 LINC00643Q86TS7 51 aa10.82□□□□□ -0.68
SEMA4D-204ENST00000420101 TMEM61Q8N0U2 210 aa10.82□□□□□ -0.68
SEMA4D-204ENST00000420101 PYGO1Q9Y3Y4 419 aa10.82□□□□□ -0.68
SEMA4D-204ENST00000420101 IGKV3-20P01619 116 aa10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 RPL39P62891 51 aaKnown RBP10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 DEFB114Q30KQ6 69 aa10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 C3orf22Q8N5N4 141 aa10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 ZNF256Q9Y2P7 627 aaPredicted RBP10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 OTOGQ6ZRI0 2925 aa10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 MIAQ16674 131 aa10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 C20orf203Q8NBC4 194 aa10.81□□□□□ -0.68
SEMA4D-204ENST00000420101 CUBNO60494 3623 aa10.8□□□□□ -0.68
SEMA4D-204ENST00000420101 ANK3Q12955 4377 aaKnown RBP10.8□□□□□ -0.68
SEMA4D-204ENST00000420101 TRGV11A0A075B6L2 103 aa10.8□□□□□ -0.68
SEMA4D-204ENST00000420101 PF4P02776 101 aa10.8□□□□□ -0.68
SEMA4D-204ENST00000420101 COPS9Q8WXC6 57 aa10.8□□□□□ -0.68
SEMA4D-204ENST00000420101 LITAFQ99732 161 aa10.8□□□□□ -0.68
SEMA4D-204ENST00000420101 KLLNB2CW77 178 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 DEFB131AP59861 70 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 RPS28P62857 69 aaKnown RBP10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 LINC00526Q96FQ7 95 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 GNRH2O43555 120 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 KRTAP10-3P60369 221 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 CHCHD5Q9BSY4 110 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 EDA2RQ9HAV5 297 aa10.79□□□□□ -0.68
SEMA4D-204ENST00000420101 IGHV1-58A0A0C4DH39 117 aa10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 F5H697 171 aa10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 I3L3M4 83 aa10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 MRPS36P82909 103 aaKnown RBP10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.78□□□□□ -0.68
SEMA4D-204ENST00000420101 ADARB2-AS1A8MUL3 147 aa10.77□□□□□ -0.68
SEMA4D-204ENST00000420101 C5orf47Q569G3 176 aa10.77□□□□□ -0.68
SEMA4D-204ENST00000420101 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
SEMA4D-204ENST00000420101 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
SEMA4D-204ENST00000420101 TRAV25A0A0B4J276 109 aa10.76□□□□□ -0.69
SEMA4D-204ENST00000420101 J3KT08 172 aa10.76□□□□□ -0.69
SEMA4D-204ENST00000420101 M0QY20 66 aa10.76□□□□□ -0.69
SEMA4D-204ENST00000420101 PPDPFQ9H3Y8 114 aa10.76□□□□□ -0.69
SEMA4D-204ENST00000420101 IGLV4-3A0A075B6K6 122 aa10.75□□□□□ -0.69
SEMA4D-204ENST00000420101 FAM236AA0A1B0GUQ0 79 aa10.75□□□□□ -0.69
SEMA4D-204ENST00000420101 FAM236BA0A1B0GV22 79 aa10.75□□□□□ -0.69
SEMA4D-204ENST00000420101 C9orf85Q96MD7 179 aa10.75□□□□□ -0.69
SEMA4D-204ENST00000420101 PRSS2P07478 247 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 FN1P02751 2386 aaKnown RBP10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 TRAV12-3A0A0B4J271 114 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 TINCRA0A1B0GVN0 87 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 DAND5Q8N907 189 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 MAP6D1Q9H9H5 199 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
SEMA4D-204ENST00000420101 TRAV12-2A0A075B6T6 113 aa10.73□□□□□ -0.69
SEMA4D-204ENST00000420101 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
SEMA4D-204ENST00000420101 TRACP01848 142 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 INAFM2P0DMQ5 153 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 CIRBPQ14011 172 aaKnown RBP10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 FAM222AQ5U5X8 452 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 MUC4Q99102 2169 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 CYSRT1A8MQ03 144 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 CRYGAP11844 174 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 COX7CP15954 63 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 VSIG2Q96IQ7 327 aa10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 CSDC2Q9Y534 153 aaKnown RBP10.72□□□□□ -0.69
SEMA4D-204ENST00000420101 HIVEP1P15822 2718 aa10.71□□□□□ -0.69
SEMA4D-204ENST00000420101 COX7A2LO14548 114 aa10.71□□□□□ -0.69
SEMA4D-204ENST00000420101 ATOX1O00244 68 aa10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 FLNBO75369 2602 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 A0A087WWL8 130 aa10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 SPRY2O43597 315 aa10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 STHQ8IWL8 128 aa10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 SPXQ9BT56 116 aa10.7□□□□□ -0.7
SEMA4D-204ENST00000420101 WIPF1O43516 503 aa10.69□□□□□ -0.7
SEMA4D-204ENST00000420101 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms