RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TENM4Q6N022 2769 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 NIPBLQ6KC79 2804 aaeCLIP10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 SAA4P35542 130 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 OR13C6PQ8NH95 151 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 CYSTM1Q9H1C7 97 aa10.81□□□□□ -0.68
NCKIPSD-204ENST00000416649 MXRA5Q9NR99 2828 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 SDIM1Q6ZPB5 146 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 KIR2DL5BQ8NHK3 375 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 CITED2Q99967 270 aaPredicted RBP10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 IGHV4-30-2A0A087WSY4 118 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 HIST2H2BDQ6DRA6 164 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 FAM19A4Q96LR4 140 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 MTORP42345 2549 aa10.8□□□□□ -0.68
NCKIPSD-204ENST00000416649 APCP25054 2843 aa10.79□□□□□ -0.68
NCKIPSD-204ENST00000416649 TIRAPP58753 221 aa10.79□□□□□ -0.68
NCKIPSD-204ENST00000416649 MRPS36P82909 103 aaKnown RBP10.79□□□□□ -0.68
NCKIPSD-204ENST00000416649 Q8N2B8 174 aa10.79□□□□□ -0.68
NCKIPSD-204ENST00000416649 HOXD3P31249 432 aaPredicted RBP10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 Q9HAA7 133 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 HECTD1Q9ULT8 2610 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 ITPR2Q14571 2701 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 IGKV3D-7A0A0C4DH55 119 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 TRACP01848 142 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 PROK1P58294 105 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 IGKV2-29A2NJV5 120 aaPredicted RBP10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 KLLNB2CW77 178 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 COX7A2LO14548 114 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
NCKIPSD-204ENST00000416649 IGHV3-16A0A0C4DH30 117 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 ZNF843Q8N446 348 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 DSCR8Q96T75 97 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 A0A1B0GX51 115 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 HIST2H2BCQ6DN03 193 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 APRG1Q8IVJ8 170 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 PEMTQ9UBM1 199 aa10.77□□□□□ -0.69
NCKIPSD-204ENST00000416649 ZNF469Q96JG9 3925 aaPredicted RBP10.76□□□□□ -0.69
NCKIPSD-204ENST00000416649 PRM2P04554 102 aa10.76□□□□□ -0.69
NCKIPSD-204ENST00000416649 SPINK13Q1W4C9 94 aa10.76□□□□□ -0.69
NCKIPSD-204ENST00000416649 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
NCKIPSD-204ENST00000416649 NF1P21359 2839 aa10.76□□□□□ -0.69
NCKIPSD-204ENST00000416649 ATP5G1P05496 136 aa10.75□□□□□ -0.69
NCKIPSD-204ENST00000416649 C2orf48Q96LS8 159 aa10.75□□□□□ -0.69
NCKIPSD-204ENST00000416649 ATOX1O00244 68 aa10.75□□□□□ -0.69
NCKIPSD-204ENST00000416649 LINC00308Q8TCZ7 52 aa10.75□□□□□ -0.69
NCKIPSD-204ENST00000416649 Q9H8V8 135 aa10.75□□□□□ -0.69
NCKIPSD-204ENST00000416649 Q9UF83 564 aa10.75□□□□□ -0.69
NCKIPSD-204ENST00000416649 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 NDUFA4O00483 81 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 IGHV4-38-2P0DP08 117 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 PF4V1P10720 104 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 KRTAP10-9P60411 292 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 PIMREGQ9BSJ6 248 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 FLNAP21333 2647 aaKnown RBP10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 A0A087WVE0 104 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 CRYGAP11844 174 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 FAM104AQ969W3 186 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 C9orf85Q96MD7 179 aa10.74□□□□□ -0.69
NCKIPSD-204ENST00000416649 C5orf56Q8N8D9 126 aa10.73□□□□□ -0.69
NCKIPSD-204ENST00000416649 FAM218AQ96MZ4 157 aa10.73□□□□□ -0.69
NCKIPSD-204ENST00000416649 DNAL4O96015 105 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 C4orf26Q17RF5 130 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 RNF152Q8N8N0 203 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 TINCRA0A1B0GVN0 87 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 CXCL5P42830 114 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
NCKIPSD-204ENST00000416649 ITPR3Q14573 2671 aa10.71□□□□□ -0.69
NCKIPSD-204ENST00000416649 HRCT1Q6UXD1 115 aa10.71□□□□□ -0.69
NCKIPSD-204ENST00000416649 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
NCKIPSD-204ENST00000416649 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
NCKIPSD-204ENST00000416649 C10orf105Q8TEF2 133 aa10.71□□□□□ -0.69
NCKIPSD-204ENST00000416649 INAFM2P0DMQ5 153 aa10.71□□□□□ -0.7
NCKIPSD-204ENST00000416649 PYGO1Q9Y3Y4 419 aa10.71□□□□□ -0.7
NCKIPSD-204ENST00000416649 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 IGHG2P01859 326 aa10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 DPH3Q96FX2 82 aa10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 C14orf132Q9NPU4 83 aa10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 AVPP01185 164 aa10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 SOSTDC1Q6X4U4 206 aa10.7□□□□□ -0.7
NCKIPSD-204ENST00000416649 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
NCKIPSD-204ENST00000416649 PIK3CD-AS1Q5SR53 167 aa10.69□□□□□ -0.7
NCKIPSD-204ENST00000416649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.69□□□□□ -0.7
NCKIPSD-204ENST00000416649 FN1P02751 2386 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-204ENST00000416649 BLCAPP62952 87 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 C10orf99Q6UWK7 81 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 NDUFA1O15239 70 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 RPS28P62857 69 aaKnown RBP10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 PRIMA1Q86XR5 153 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 C22orf24Q9Y442 160 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 TIMM17BO60830 172 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 MALP21145 153 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 1077.7 ms