RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
SMARCA4-202ENST00000413806 FAM19A3Q7Z5A8 133 aa10.22□□□□□ -0.77
SMARCA4-202ENST00000413806 UBE2AP49459 152 aa10.21□□□□□ -0.77
SMARCA4-202ENST00000413806 PMAIP1Q13794 54 aa10.21□□□□□ -0.77
SMARCA4-202ENST00000413806 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.78
SMARCA4-202ENST00000413806 REG3AQ06141 175 aa10.21□□□□□ -0.78
SMARCA4-202ENST00000413806 PCNX3Q9H6A9 2034 aa10.2□□□□□ -0.78
SMARCA4-202ENST00000413806 IBA57-AS1B1ANH7 110 aa10.2□□□□□ -0.78
SMARCA4-202ENST00000413806 NRACQ8N912 160 aa10.2□□□□□ -0.78
SMARCA4-202ENST00000413806 Q8N976 141 aa10.2□□□□□ -0.78
SMARCA4-202ENST00000413806 ARHGAP21Q5T5U3 1957 aa10.19□□□□□ -0.78
SMARCA4-202ENST00000413806 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
SMARCA4-202ENST00000413806 MED12LQ86YW9 2145 aa10.19□□□□□ -0.78
SMARCA4-202ENST00000413806 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
SMARCA4-202ENST00000413806 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
SMARCA4-202ENST00000413806 MIFP14174 115 aa10.18□□□□□ -0.78
SMARCA4-202ENST00000413806 LOC107984640A0A0U1RRK4 108 aa10.18□□□□□ -0.78
SMARCA4-202ENST00000413806 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
SMARCA4-202ENST00000413806 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 PRR4Q16378 134 aa10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 FAM222AQ5U5X8 452 aa10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 KLLNB2CW77 178 aa10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 K7ERS5 55 aa10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 KLK5Q9Y337 293 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-202ENST00000413806 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 CEP192Q8TEP8 1941 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 NOTCH3Q9UM47 2321 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 Q6ZSV7 163 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 WFDC10BQ8IUB3 73 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 TRBV6-8A0A0A6YYG3 113 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 PPDPFQ9H3Y8 114 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 TSHBP01222 138 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
SMARCA4-202ENST00000413806 C14orf177Q52M58 125 aa10.15□□□□□ -0.78
SMARCA4-202ENST00000413806 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
SMARCA4-202ENST00000413806 IGLV1-40P01703 118 aa10.15□□□□□ -0.78
SMARCA4-202ENST00000413806 NACAE9PAV3 2078 aa10.15□□□□□ -0.79
SMARCA4-202ENST00000413806 C11orf45Q8TAV5 145 aa10.15□□□□□ -0.79
SMARCA4-202ENST00000413806 C9orf85Q96MD7 179 aa10.15□□□□□ -0.79
SMARCA4-202ENST00000413806 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 ZFHX2Q9C0A1 2572 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 TRAV7A0A075B6U4 112 aa10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 LINC00310P59036 64 aa10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 C11orf21Q9P2W6 132 aa10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 PRR9Q5T870 116 aa10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 ATG2AQ2TAZ0 1938 aa10.14□□□□□ -0.79
SMARCA4-202ENST00000413806 LRP4O75096 1905 aa10.13□□□□□ -0.79
SMARCA4-202ENST00000413806 Q6ZS46 218 aa10.13□□□□□ -0.79
SMARCA4-202ENST00000413806 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
SMARCA4-202ENST00000413806 CCKP06307 115 aa10.12□□□□□ -0.79
SMARCA4-202ENST00000413806 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
SMARCA4-202ENST00000413806 B9D2Q9BPU9 175 aa10.12□□□□□ -0.79
SMARCA4-202ENST00000413806 PLCE1Q9P212 2302 aa10.12□□□□□ -0.79
SMARCA4-202ENST00000413806 C10orf99Q6UWK7 81 aa10.11□□□□□ -0.79
SMARCA4-202ENST00000413806 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
SMARCA4-202ENST00000413806 PROK1P58294 105 aa10.11□□□□□ -0.79
SMARCA4-202ENST00000413806 FAM30AQ9NZY2 134 aa10.11□□□□□ -0.79
SMARCA4-202ENST00000413806 PRO0628Q9UI54 55 aa10.11□□□□□ -0.79
SMARCA4-202ENST00000413806 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
SMARCA4-202ENST00000413806 C3orf84H3BNL1 204 aa10.1□□□□□ -0.79
SMARCA4-202ENST00000413806 KIAA1549Q9HCM3 1950 aa10.1□□□□□ -0.79
SMARCA4-202ENST00000413806 IL17DQ8TAD2 202 aa10.1□□□□□ -0.79
SMARCA4-202ENST00000413806 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
SMARCA4-202ENST00000413806 DCANP1Q8TF63 244 aa10.09□□□□□ -0.79
SMARCA4-202ENST00000413806 A0A087WVE0 104 aa10.09□□□□□ -0.79
SMARCA4-202ENST00000413806 CRYGDP07320 174 aa10.09□□□□□ -0.79
SMARCA4-202ENST00000413806 A8MZ25 164 aa10.09□□□□□ -0.79
SMARCA4-202ENST00000413806 C6orf99Q4VX62 202 aa10.09□□□□□ -0.79
SMARCA4-202ENST00000413806 CRIP2P52943 208 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-202ENST00000413806 SMIM11BQ8TCY0 68 aa10.07□□□□□ -0.8
SMARCA4-202ENST00000413806 C1orf158Q8N1D5 194 aa10.07□□□□□ -0.8
SMARCA4-202ENST00000413806 MRGPRG-AS1Q2M3A8 158 aa10.07□□□□□ -0.8
SMARCA4-202ENST00000413806 UBE2D1P51668 147 aa10.06□□□□□ -0.8
SMARCA4-202ENST00000413806 HILS1P60008 231 aa10.06□□□□□ -0.8
SMARCA4-202ENST00000413806 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
SMARCA4-202ENST00000413806 DEFB131BA0A096LNP1 70 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 MUC6Q6W4X9 2439 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 UBE2D3P61077 147 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 UBE2D2P62837 147 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 PRYO14603 147 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 URB1-AS1Q96HZ7 61 aa10.05□□□□□ -0.8
SMARCA4-202ENST00000413806 PSPHP1O15172 72 aa10.04□□□□□ -0.8
SMARCA4-202ENST00000413806 GAS8-AS1O95177 125 aa10.04□□□□□ -0.8
SMARCA4-202ENST00000413806 COL5A1P20908 1838 aaPredicted RBP10.04□□□□□ -0.8
SMARCA4-202ENST00000413806 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
SMARCA4-202ENST00000413806 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
SMARCA4-202ENST00000413806 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 IGIPA6NJ69 53 aa10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 Q6ZQY7 126 aa10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 BBC3Q96PG8 261 aaPredicted RBP10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 Q8N9L7 120 aa10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 WFDC10AQ9H1F0 79 aa10.03□□□□□ -0.8
SMARCA4-202ENST00000413806 MUC7Q8TAX7 377 aa10.02□□□□□ -0.8
SMARCA4-202ENST00000413806 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms