RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
TRAFD1-202ENST00000412615 A0A0B4J2C4 111 aa8.23□□□□□ -1.09
TRAFD1-202ENST00000412615 GIG44P09565 113 aaPredicted RBP8.23□□□□□ -1.09
TRAFD1-202ENST00000412615 CCDC168Q8NDH2 2452 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 ADARB2-AS1A8MUL3 147 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 NDUFA7O95182 113 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 SH2D6Q7Z4S9 175 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 MTURNQ8N3F0 131 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 C19orf73Q9NVV2 129 aa8.22□□□□□ -1.09
TRAFD1-202ENST00000412615 IGLV5-45A0A087WSX0 123 aa8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 SCGB1C2P0DMR2 95 aa8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 RPL35AP18077 110 aaKnown RBP8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 LITAFQ99732 161 aa8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 CDKN2A-AS1Q9UH64 79 aa8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 ERG28Q9UKR5 140 aa8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.09
TRAFD1-202ENST00000412615 IGHV3-33P01772 117 aa8.21□□□□□ -1.1
TRAFD1-202ENST00000412615 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.1
TRAFD1-202ENST00000412615 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
TRAFD1-202ENST00000412615 WNK1Q9H4A3 2382 aa8.21□□□□□ -1.1
TRAFD1-202ENST00000412615 PRSS2P07478 247 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 HERVK_113P63121 156 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 SPANXDQ9BXN6 97 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 SPANXCQ9NY87 97 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 PDZD2O15018 2839 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 TRGV2A0A075B6R0 118 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 TCL1BO95988 128 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE4Q13068 117 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE5Q13069 117 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
TRAFD1-202ENST00000412615 TENM4Q6N022 2769 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 PLAC8L1A1L4L8 177 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 A8MZ25 164 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 LINC00694P0DN24 101 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE7O76087 117 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE12FP0CL80 117 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE12GP0CL81 117 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE12IP0CL82 117 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 SHISA2Q6UWI4 295 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 FAM19A3Q7Z5A8 133 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 CSNK1G2-AS1Q8NCQ2 148 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 OVOL2Q9BRP0 275 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 NF1P21359 2839 aa8.19□□□□□ -1.1
TRAFD1-202ENST00000412615 TIMM17BO60830 172 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 MIAQ16674 131 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 ADAMTSL4-AS1Q5T5F5 129 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 LINC00242Q5T6M2 205 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 SBSPONQ8IVN8 264 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 ATP6V0E2Q8NHE4 81 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 GTSF1LQ9H1H1 148 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 TRBV6-4A0A1B0GX49 114 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 TMEM101Q96IK0 257 aa8.18□□□□□ -1.1
TRAFD1-202ENST00000412615 COX6A2Q02221 97 aa8.17□□□□□ -1.1
TRAFD1-202ENST00000412615 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.17□□□□□ -1.1
TRAFD1-202ENST00000412615 NDUFA1O15239 70 aa8.17□□□□□ -1.1
TRAFD1-202ENST00000412615 CDC42SE2Q9NRR3 84 aa8.17□□□□□ -1.1
TRAFD1-202ENST00000412615 H7C2G1 150 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 UBE2L6O14933 153 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 Q1RN00 199 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 RNF183Q96D59 192 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 TMEM243Q9BU79 118 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 IFITM1P13164 125 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 CUBNO60494 3623 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 TRGV4A0A0C4DH28 118 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 FOXI1Q12951 378 aa8.16□□□□□ -1.1
TRAFD1-202ENST00000412615 ANK3Q12955 4377 aaKnown RBP8.15□□□□□ -1.1
TRAFD1-202ENST00000412615 H7C423 109 aa8.15□□□□□ -1.1
TRAFD1-202ENST00000412615 PF4P02776 101 aa8.15□□□□□ -1.1
TRAFD1-202ENST00000412615 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.11
TRAFD1-202ENST00000412615 SMR3AQ99954 134 aa8.15□□□□□ -1.11
TRAFD1-202ENST00000412615 ACANP16112 2415 aa8.14□□□□□ -1.11
TRAFD1-202ENST00000412615 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
TRAFD1-202ENST00000412615 INSL3P51460 131 aa8.14□□□□□ -1.11
TRAFD1-202ENST00000412615 TEN1Q86WV5 123 aa8.14□□□□□ -1.11
TRAFD1-202ENST00000412615 Q9H8V8 135 aa8.14□□□□□ -1.11
TRAFD1-202ENST00000412615 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 NPC2P61916 151 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 KRTAP10-3P60369 221 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 FHL2Q14192 279 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 LINC00482Q8N8I6 264 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 SIGMAR1Q99720 223 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
TRAFD1-202ENST00000412615 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
TRAFD1-202ENST00000412615 M0QXV9 152 aa8.12□□□□□ -1.11
TRAFD1-202ENST00000412615 SLC25A20O43772 301 aa8.12□□□□□ -1.11
TRAFD1-202ENST00000412615 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 C9JAW5 83 aa8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 TRIAP1O43715 76 aa8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 LY6G6DO95868 133 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms