RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LMO4P61968 165 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 C1orf147Q96MC9 270 aaPredicted RBP6.3□□□□□ -1.4
SCN9A-203ENST00000409672 NCOR1P1Q9H4R4 102 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 SPINK1P00995 79 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 TNFRSF13BO14836 293 aaPredicted RBP6.3□□□□□ -1.4
SCN9A-203ENST00000409672 UFSP1Q6NVU6 142 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 PTPRBP23467 1997 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 FSHBP01225 129 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 A8MZ25 164 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 PRYO14603 147 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 MIFP14174 115 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 SYCNQ0VAF6 134 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 KRTAP10-9P60411 292 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 WFDC2Q14508 124 aa6.29□□□□□ -1.4
SCN9A-203ENST00000409672 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 PTH2Q96A98 100 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 FXYD2P54710 66 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 SERP1Q9Y6X1 66 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 XGP55808 180 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 TDRG1Q3Y452 100 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 A0A0U1RQV1 116 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 ZNF80P51504 273 aaPredicted RBP6.28□□□□□ -1.4
SCN9A-203ENST00000409672 NEXN-AS1Q8NBZ9 246 aa6.28□□□□□ -1.4
SCN9A-203ENST00000409672 TRBV6-8A0A0A6YYG3 113 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 ENHOQ6UWT2 76 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 LRRC75A-AS1Q8N1F1 130 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 CPAMD8Q8IZJ3 1885 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 KIR2DL5BA0A0G2JN68 375 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 KIR2DL5BA0A0G2JPC4 375 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 KIR2DL5AQ8N109 375 aa6.27□□□□□ -1.41
SCN9A-203ENST00000409672 EDN2P20800 178 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 NUPR1O60356 82 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 JMJD7-PLA2G4BH0Y9G9 81 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 CFAP126Q5VTH2 177 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 CCKP06307 115 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 CDSNQ15517 529 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 POU2AF1Q16633 256 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
SCN9A-203ENST00000409672 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 SPATA12Q7Z6I5 190 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 CDKN2A-AS1Q9UH64 79 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 U3KQK5 164 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 IGLV1-47P01700 117 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 SMIM9A6NGZ8 99 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 G3V4G9 280 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 FAM167A-AS1Q96KT0 104 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
SCN9A-203ENST00000409672 LINC00322Q6ZN03 302 aaPredicted RBP6.24□□□□□ -1.41
SCN9A-203ENST00000409672 M0QXV9 152 aa6.24□□□□□ -1.41
SCN9A-203ENST00000409672 C6orf99Q4VX62 202 aa6.24□□□□□ -1.41
SCN9A-203ENST00000409672 IGLV3-1P01715 115 aa6.24□□□□□ -1.41
SCN9A-203ENST00000409672 H3BQ85 93 aa6.24□□□□□ -1.41
SCN9A-203ENST00000409672 NDUFC2O95298 119 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 PIEZO2Q9H5I5 2752 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 ESRGQ1W209 222 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
SCN9A-203ENST00000409672 C20orf144Q9BQM9 153 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 MIAQ16674 131 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 C10orf25Q5T742 122 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 C6orf223Q8N319 242 aa6.23□□□□□ -1.41
SCN9A-203ENST00000409672 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
SCN9A-203ENST00000409672 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 E9PLD3 99 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 ATOX1O00244 68 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 CENPFP49454 3210 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 C1orf134Q5TEV5 83 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 C20orf203Q8NBC4 194 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 A0A0J9YXY3 114 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 NDUFA7O95182 113 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 Q6ZTC4 211 aa6.22□□□□□ -1.41
SCN9A-203ENST00000409672 TMEM89A2RUT3 159 aa6.21□□□□□ -1.41
SCN9A-203ENST00000409672 K7EQG2 157 aa6.21□□□□□ -1.41
SCN9A-203ENST00000409672 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.42
SCN9A-203ENST00000409672 C20orf197Q8N268 126 aa6.21□□□□□ -1.42
SCN9A-203ENST00000409672 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
SCN9A-203ENST00000409672 TCL1BO95988 128 aa6.21□□□□□ -1.42
SCN9A-203ENST00000409672 SERP2Q8N6R1 65 aa6.21□□□□□ -1.42
SCN9A-203ENST00000409672 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
SCN9A-203ENST00000409672 TRBV6-5A0A0K0K1A5 114 aa6.21□□□□□ -1.42
SCN9A-203ENST00000409672 RBX1P62877 108 aa6.2□□□□□ -1.42
SCN9A-203ENST00000409672 LRRK2Q5S007 2527 aa6.2□□□□□ -1.42
SCN9A-203ENST00000409672 LTBP2Q14767 1821 aa6.2□□□□□ -1.42
SCN9A-203ENST00000409672 IL15RAQ13261 267 aa6.2□□□□□ -1.42
SCN9A-203ENST00000409672 SBSPONQ8IVN8 264 aa6.2□□□□□ -1.42
SCN9A-203ENST00000409672 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
SCN9A-203ENST00000409672 CELA1Q9UNI1 258 aa6.19□□□□□ -1.42
SCN9A-203ENST00000409672 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
SCN9A-203ENST00000409672 Q6ZSR3 168 aa6.19□□□□□ -1.42
SCN9A-203ENST00000409672 A6NED7 52 aa6.19□□□□□ -1.42
SCN9A-203ENST00000409672 FBXL19-AS1Q494R0 122 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms