RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TINCRA0A1B0GVN0 87 aa11.92□□□□□ -0.5
COL23A1-202ENST00000407622 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
COL23A1-202ENST00000407622 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
COL23A1-202ENST00000407622 A0A0B4J2C4 111 aa11.92□□□□□ -0.5
COL23A1-202ENST00000407622 VSIG2Q96IQ7 327 aa11.92□□□□□ -0.5
COL23A1-202ENST00000407622 NDUFA12Q9UI09 145 aa11.92□□□□□ -0.5
COL23A1-202ENST00000407622 ACANP16112 2415 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 TRBV20-1A0A075B6N2 111 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 FHL3Q13643 280 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.91□□□□□ -0.5
COL23A1-202ENST00000407622 ATP6V0E2Q8NHE4 81 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 NPC2P61916 151 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
COL23A1-202ENST00000407622 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
COL23A1-202ENST00000407622 PRSS2P07478 247 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 STHQ8IWL8 128 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 DNAJC30Q96LL9 226 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 MTORP42345 2549 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 TRGV1A0A0A0MS02 117 aa11.89□□□□□ -0.51
COL23A1-202ENST00000407622 TEN1Q86WV5 123 aa11.88□□□□□ -0.51
COL23A1-202ENST00000407622 IL17DQ8TAD2 202 aa11.88□□□□□ -0.51
COL23A1-202ENST00000407622 LINC00694P0DN24 101 aa11.88□□□□□ -0.51
COL23A1-202ENST00000407622 COX6A2Q02221 97 aa11.88□□□□□ -0.51
COL23A1-202ENST00000407622 CDIP1Q9H305 208 aa11.88□□□□□ -0.51
COL23A1-202ENST00000407622 NOTCH2Q04721 2471 aa11.88□□□□□ -0.51
COL23A1-202ENST00000407622 CCL24O00175 119 aa11.87□□□□□ -0.51
COL23A1-202ENST00000407622 Q1RN00 199 aa11.87□□□□□ -0.51
COL23A1-202ENST00000407622 Q6ZTI0 123 aa11.87□□□□□ -0.51
COL23A1-202ENST00000407622 ANKRD29Q8N6D5 301 aa11.87□□□□□ -0.51
COL23A1-202ENST00000407622 GEMIN7Q9H840 131 aaKnown RBP11.87□□□□□ -0.51
COL23A1-202ENST00000407622 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.87□□□□□ -0.51
COL23A1-202ENST00000407622 NDUFA7O95182 113 aa11.87□□□□□ -0.51
COL23A1-202ENST00000407622 TMEM86BQ8N661 226 aa11.87□□□□□ -0.51
COL23A1-202ENST00000407622 C9JAW5 83 aa11.86□□□□□ -0.51
COL23A1-202ENST00000407622 DAND5Q8N907 189 aa11.86□□□□□ -0.51
COL23A1-202ENST00000407622 OTOGQ6ZRI0 2925 aa11.86□□□□□ -0.51
COL23A1-202ENST00000407622 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
COL23A1-202ENST00000407622 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
COL23A1-202ENST00000407622 ZFAND6Q6FIF0 208 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 PPDPFLQ8WWR9 84 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 SMR3AQ99954 134 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 WFDC10AQ9H1F0 79 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 SPANXCQ9NY87 97 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 TRIAP1O43715 76 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 SLC25A20O43772 301 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 MIAQ16674 131 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
COL23A1-202ENST00000407622 TRAV25A0A0B4J276 109 aa11.84□□□□□ -0.51
COL23A1-202ENST00000407622 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
COL23A1-202ENST00000407622 NTM-AS1Q6ZSK4 140 aa11.84□□□□□ -0.51
COL23A1-202ENST00000407622 ANK3Q12955 4377 aaKnown RBP11.83□□□□□ -0.51
COL23A1-202ENST00000407622 SVIPQ8NHG7 77 aa11.83□□□□□ -0.51
COL23A1-202ENST00000407622 IGLV5-45A0A087WSX0 123 aa11.83□□□□□ -0.52
COL23A1-202ENST00000407622 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
COL23A1-202ENST00000407622 LINC00242Q5T6M2 205 aa11.82□□□□□ -0.52
COL23A1-202ENST00000407622 TIRAPP58753 221 aa11.82□□□□□ -0.52
COL23A1-202ENST00000407622 K7EQD1 137 aa11.81□□□□□ -0.52
COL23A1-202ENST00000407622 NOP10Q9NPE3 64 aaKnown RBP11.81□□□□□ -0.52
COL23A1-202ENST00000407622 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 LY6G6DO95868 133 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 GAGE4Q13068 117 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 GAGE5Q13069 117 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 MT-ATP8P03928 68 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 LINC01620Q4KN68 170 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
COL23A1-202ENST00000407622 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
COL23A1-202ENST00000407622 NDUFA1O15239 70 aa11.79□□□□□ -0.52
COL23A1-202ENST00000407622 XGP55808 180 aa11.79□□□□□ -0.52
COL23A1-202ENST00000407622 RPL36AP83881 106 aaKnown RBP11.79□□□□□ -0.52
COL23A1-202ENST00000407622 RPL36ALQ969Q0 106 aaKnown RBP11.79□□□□□ -0.52
COL23A1-202ENST00000407622 ATXN8Q156A1 80 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 LINC01006Q8NI28 216 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 TRAV4A0A0B4J268 109 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 IGLV5-39A0A0G2JS06 123 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 A0A0U1RRA0 63 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 PLAC8L1A1L4L8 177 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 RPL35AP18077 110 aaKnown RBP11.78□□□□□ -0.52
COL23A1-202ENST00000407622 Q9H8V8 135 aa11.78□□□□□ -0.52
COL23A1-202ENST00000407622 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.52
COL23A1-202ENST00000407622 HERVK_113P63121 156 aa11.77□□□□□ -0.53
COL23A1-202ENST00000407622 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
COL23A1-202ENST00000407622 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
COL23A1-202ENST00000407622 A0A1B0GV72 72 aa11.76□□□□□ -0.53
COL23A1-202ENST00000407622 TIMM17BO60830 172 aa11.76□□□□□ -0.53
COL23A1-202ENST00000407622 DAZ2Q13117 558 aaKnown RBP11.76□□□□□ -0.53
COL23A1-202ENST00000407622 DAZ4Q86SG3 579 aaKnown RBP11.76□□□□□ -0.53
COL23A1-202ENST00000407622 NTN5Q8WTR8 489 aaPredicted RBP11.76□□□□□ -0.53
COL23A1-202ENST00000407622 CLEC2BQ92478 149 aa11.76□□□□□ -0.53
COL23A1-202ENST00000407622 DAZ3Q9NR90 486 aaKnown RBP11.76□□□□□ -0.53
COL23A1-202ENST00000407622 GAGE7O76087 117 aa11.75□□□□□ -0.53
COL23A1-202ENST00000407622 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
COL23A1-202ENST00000407622 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
COL23A1-202ENST00000407622 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
COL23A1-202ENST00000407622 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms