RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 A0A0J9YY99 117 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 K7EP13 123 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 C12orf74Q32Q52 190 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 Q9UF83 564 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
LSP1-203ENST00000405957 TRGV2A0A075B6R0 118 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 WIPF1O43516 503 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 FAM104AQ969W3 186 aa12.28□□□□□ -0.44
LSP1-203ENST00000405957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.27□□□□□ -0.45
LSP1-203ENST00000405957 TRBV6-4A0A1B0GX49 114 aa12.27□□□□□ -0.45
LSP1-203ENST00000405957 IGKV2-29A2NJV5 120 aaPredicted RBP12.27□□□□□ -0.45
LSP1-203ENST00000405957 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.45
LSP1-203ENST00000405957 SLC25A29Q8N8R3 303 aa12.27□□□□□ -0.45
LSP1-203ENST00000405957 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
LSP1-203ENST00000405957 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
LSP1-203ENST00000405957 UBE2D3P61077 147 aa12.26□□□□□ -0.45
LSP1-203ENST00000405957 UBE2D2P62837 147 aa12.26□□□□□ -0.45
LSP1-203ENST00000405957 GTSF1LQ9H1H1 148 aa12.26□□□□□ -0.45
LSP1-203ENST00000405957 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
LSP1-203ENST00000405957 K7ERJ3 54 aa12.25□□□□□ -0.45
LSP1-203ENST00000405957 PKD1L1Q8TDX9 2849 aa12.25□□□□□ -0.45
LSP1-203ENST00000405957 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
LSP1-203ENST00000405957 CEMP1Q6PRD7 247 aaPredicted RBP12.24□□□□□ -0.45
LSP1-203ENST00000405957 Q6ZUT4 128 aa12.24□□□□□ -0.45
LSP1-203ENST00000405957 GEMIN7Q9H840 131 aaKnown RBP12.24□□□□□ -0.45
LSP1-203ENST00000405957 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 IGHV1-58A0A0C4DH39 117 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 IGLL5B9A064 214 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 H7C423 109 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 GAGE7O76087 117 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 TIRAPP58753 221 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 UBE2D1P51668 147 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
LSP1-203ENST00000405957 IGLV5-45A0A087WSX0 123 aa12.22□□□□□ -0.45
LSP1-203ENST00000405957 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
LSP1-203ENST00000405957 TRGV4A0A0C4DH28 118 aa12.21□□□□□ -0.45
LSP1-203ENST00000405957 FAM19A3Q7Z5A8 133 aa12.21□□□□□ -0.45
LSP1-203ENST00000405957 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
LSP1-203ENST00000405957 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 APOC4P55056 127 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 HERVK_113P63121 156 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 GAGE12JA6NER3 117 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 GAGE4Q13068 117 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 GAGE5Q13069 117 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 GAGE13Q4V321 117 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 SBSPONQ8IVN8 264 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 VSIG2Q96IQ7 327 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 X6R8D5 127 aa12.2□□□□□ -0.46
LSP1-203ENST00000405957 UBE2L6O14933 153 aa12.18□□□□□ -0.46
LSP1-203ENST00000405957 RNASE13Q5GAN3 156 aaKnown RBP12.18□□□□□ -0.46
LSP1-203ENST00000405957 LYRM7Q5U5X0 104 aa12.18□□□□□ -0.46
LSP1-203ENST00000405957 LINC00612Q8N6U2 182 aa12.18□□□□□ -0.46
LSP1-203ENST00000405957 TMEM101Q96IK0 257 aa12.18□□□□□ -0.46
LSP1-203ENST00000405957 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
LSP1-203ENST00000405957 NTM-AS1Q6ZSK4 140 aa12.18□□□□□ -0.46
LSP1-203ENST00000405957 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
LSP1-203ENST00000405957 KRTAP21-3Q3LHN1 58 aa12.17□□□□□ -0.46
LSP1-203ENST00000405957 CMYA5Q8N3K9 4069 aa12.16□□□□□ -0.46
LSP1-203ENST00000405957 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
LSP1-203ENST00000405957 FHL2Q14192 279 aa12.16□□□□□ -0.46
LSP1-203ENST00000405957 ZFAND6Q6FIF0 208 aa12.15□□□□□ -0.46
LSP1-203ENST00000405957 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
LSP1-203ENST00000405957 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
LSP1-203ENST00000405957 NDUFA12Q9UI09 145 aa12.15□□□□□ -0.46
LSP1-203ENST00000405957 CDC42SE2Q9NRR3 84 aa12.15□□□□□ -0.46
LSP1-203ENST00000405957 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
LSP1-203ENST00000405957 TIMM17BO60830 172 aa12.14□□□□□ -0.47
LSP1-203ENST00000405957 LINC00694P0DN24 101 aa12.14□□□□□ -0.47
LSP1-203ENST00000405957 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
LSP1-203ENST00000405957 TRAV8-3A0A0A6YYJ7 113 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 K7ERU9 68 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 SPINK8P0C7L1 97 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 OCIAD2Q56VL3 154 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 LINC00242Q5T6M2 205 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
LSP1-203ENST00000405957 A0A0B4J2C4 111 aa12.12□□□□□ -0.47
LSP1-203ENST00000405957 DNHD1Q96M86 4753 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 F8W1H4 67 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 NDUFA1O15239 70 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 APOMO95445 188 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 CFC1P0CG37 223 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 PRO1854Q9UHT4 67 aa12.11□□□□□ -0.47
LSP1-203ENST00000405957 TSPAN13O95857 204 aa12.1□□□□□ -0.47
LSP1-203ENST00000405957 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
LSP1-203ENST00000405957 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms