RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 DEFB135Q30KP9 77 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 C9orf85Q96MD7 179 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 PCSK5Q92824 1860 aa13.07□□□□□ -0.32
SNED1-204ENST00000401884 TSHBP01222 138 aa13.07□□□□□ -0.32
SNED1-204ENST00000401884 SPART-AS1P0CW21 52 aa13.07□□□□□ -0.32
SNED1-204ENST00000401884 HAMPP81172 84 aa13.06□□□□□ -0.32
SNED1-204ENST00000401884 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
SNED1-204ENST00000401884 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
SNED1-204ENST00000401884 ORMDL1Q9P0S3 153 aa13.05□□□□□ -0.32
SNED1-204ENST00000401884 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
SNED1-204ENST00000401884 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
SNED1-204ENST00000401884 PYGO1Q9Y3Y4 419 aa13.05□□□□□ -0.32
SNED1-204ENST00000401884 ACYP1P07311 99 aa13.05□□□□□ -0.32
SNED1-204ENST00000401884 IGHV3-33P01772 117 aa13.04□□□□□ -0.32
SNED1-204ENST00000401884 IGIPA6NJ69 53 aa13.03□□□□□ -0.32
SNED1-204ENST00000401884 UBE2DNLQ8IWF7 75 aa13.03□□□□□ -0.32
SNED1-204ENST00000401884 A8MZ25 164 aa13.03□□□□□ -0.32
SNED1-204ENST00000401884 B5MCH6 92 aa13.03□□□□□ -0.32
SNED1-204ENST00000401884 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
SNED1-204ENST00000401884 PSCAO43653 123 aa13.02□□□□□ -0.33
SNED1-204ENST00000401884 LECT2O14960 151 aa13.01□□□□□ -0.33
SNED1-204ENST00000401884 IGHV3-30P01768 117 aa13.01□□□□□ -0.33
SNED1-204ENST00000401884 IGHV3-30-5P0DP03 117 aa13.01□□□□□ -0.33
SNED1-204ENST00000401884 DSCR8Q96T75 97 aa13.01□□□□□ -0.33
SNED1-204ENST00000401884 WDFY4Q6ZS81 3184 aa13□□□□□ -0.33
SNED1-204ENST00000401884 IGKV2D-24A0A075B6R9 120 aa12.99□□□□□ -0.33
SNED1-204ENST00000401884 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
SNED1-204ENST00000401884 IGLV2-18A0A075B6J9 118 aa12.99□□□□□ -0.33
SNED1-204ENST00000401884 CDH23Q9H251 3354 aa12.99□□□□□ -0.33
SNED1-204ENST00000401884 TIRAPP58753 221 aa12.99□□□□□ -0.33
SNED1-204ENST00000401884 ZNF843Q8N446 348 aa12.99□□□□□ -0.33
SNED1-204ENST00000401884 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
SNED1-204ENST00000401884 TRIAP1O43715 76 aa12.98□□□□□ -0.33
SNED1-204ENST00000401884 C1orf43Q9BWL3 253 aa12.98□□□□□ -0.33
SNED1-204ENST00000401884 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
SNED1-204ENST00000401884 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
SNED1-204ENST00000401884 Q9HAA7 133 aa12.97□□□□□ -0.33
SNED1-204ENST00000401884 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
SNED1-204ENST00000401884 SPANXCQ9NY87 97 aa12.97□□□□□ -0.33
SNED1-204ENST00000401884 INSL3P51460 131 aa12.96□□□□□ -0.33
SNED1-204ENST00000401884 BRI3O95415 125 aa12.96□□□□□ -0.33
SNED1-204ENST00000401884 F8WEM9 126 aa12.96□□□□□ -0.34
SNED1-204ENST00000401884 UFSP1Q6NVU6 142 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 MT-ATP8P03928 68 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 FAM222AQ5U5X8 452 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 NDUFA1O15239 70 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 PIK3CD-AS1Q5SR53 167 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 LINC01006Q8NI28 216 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 CENPEQ02224 2701 aa12.95□□□□□ -0.34
SNED1-204ENST00000401884 UBE2D4Q9Y2X8 147 aa12.94□□□□□ -0.34
SNED1-204ENST00000401884 TRBV30A0A0K0K1B3 111 aa12.94□□□□□ -0.34
SNED1-204ENST00000401884 WFDC10AQ9H1F0 79 aa12.94□□□□□ -0.34
SNED1-204ENST00000401884 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
SNED1-204ENST00000401884 TRBV6-4A0A1B0GX49 114 aa12.93□□□□□ -0.34
SNED1-204ENST00000401884 CXCL5P42830 114 aa12.93□□□□□ -0.34
SNED1-204ENST00000401884 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
SNED1-204ENST00000401884 TRBV6-8A0A0A6YYG3 113 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 IGKV3D-7A0A0C4DH55 119 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 FAM236AA0A1B0GUQ0 79 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 FAM236BA0A1B0GV22 79 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 TRAV26-1A0A087WT03 109 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 MRPS36P82909 103 aaKnown RBP12.92□□□□□ -0.34
SNED1-204ENST00000401884 MGAQ8IWI9 3026 aa12.92□□□□□ -0.34
SNED1-204ENST00000401884 LINC00269Q8N2A0 174 aa12.91□□□□□ -0.34
SNED1-204ENST00000401884 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
SNED1-204ENST00000401884 ODF3L2Q3SX64 289 aa12.91□□□□□ -0.34
SNED1-204ENST00000401884 UBE2D1P51668 147 aa12.89□□□□□ -0.35
SNED1-204ENST00000401884 NCR3O14931 201 aa12.89□□□□□ -0.35
SNED1-204ENST00000401884 POM121L12Q8N7R1 296 aa12.88□□□□□ -0.35
SNED1-204ENST00000401884 SS18L2Q9UHA2 77 aa12.88□□□□□ -0.35
SNED1-204ENST00000401884 H7C423 109 aa12.88□□□□□ -0.35
SNED1-204ENST00000401884 MRAPQ8TCY5 172 aa12.88□□□□□ -0.35
SNED1-204ENST00000401884 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
SNED1-204ENST00000401884 TSPEAR-AS2P59090 65 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 LOC100131303A0A0U1RQF7 123 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 TIMM17BO60830 172 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 RMI2Q96E14 147 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 ZNF580Q9UK33 172 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 JMJD7-PLA2G4BH0Y9G9 81 aa12.87□□□□□ -0.35
SNED1-204ENST00000401884 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
SNED1-204ENST00000401884 REG3AQ06141 175 aa12.86□□□□□ -0.35
SNED1-204ENST00000401884 C14orf132Q9NPU4 83 aa12.85□□□□□ -0.35
SNED1-204ENST00000401884 LINC00643Q86TS7 51 aa12.85□□□□□ -0.35
SNED1-204ENST00000401884 DEFB105AQ8NG35 78 aa12.85□□□□□ -0.35
SNED1-204ENST00000401884 LYRM9A8MSI8 78 aa12.84□□□□□ -0.35
SNED1-204ENST00000401884 CHCHD10Q8WYQ3 142 aaPredicted RBP12.84□□□□□ -0.35
SNED1-204ENST00000401884 CITED1Q99966 193 aa12.84□□□□□ -0.35
SNED1-204ENST00000401884 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
SNED1-204ENST00000401884 TRACP01848 142 aa12.83□□□□□ -0.35
SNED1-204ENST00000401884 LINC00242Q5T6M2 205 aa12.83□□□□□ -0.36
SNED1-204ENST00000401884 NDUFA7O95182 113 aa12.83□□□□□ -0.36
SNED1-204ENST00000401884 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
SNED1-204ENST00000401884 A0A1B0GX51 115 aa12.82□□□□□ -0.36
SNED1-204ENST00000401884 UBE2D3P61077 147 aa12.82□□□□□ -0.36
SNED1-204ENST00000401884 UBE2D2P62837 147 aa12.82□□□□□ -0.36
SNED1-204ENST00000401884 RPL18AQ02543 176 aaKnown RBP12.82□□□□□ -0.36
SNED1-204ENST00000401884 CDC42SE2Q9NRR3 84 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms