RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 HMGN3Q15651 99 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 ZNF880Q6PDB4 577 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 Q8NAQ8 132 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.62□□□□□ -1.99
TRPS1-202ENST00000395713 TCEAL7Q9BRU2 100 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 GABARAPL1Q9H0R8 117 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 CKLFQ9UBR5 152 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 NAT8Q9UHE5 227 aa2.62□□□□□ -1.99
TRPS1-202ENST00000395713 IGKV3-7A0A075B6H7 116 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 TRBV24-1A0A075B6N3 115 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 ZNF727A8MUV8 499 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 M0R2Z0 102 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 DPM2O94777 84 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 CTSDP07339 412 aaPredicted RBP2.61□□□□□ -1.99
TRPS1-202ENST00000395713 CSN1S1P47710 185 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 ZNF767PQ75MW2 155 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 C6orf201Q7Z4U5 140 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 C10orf126Q8N4M7 172 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 TNFSF18Q9UNG2 199 aa2.61□□□□□ -1.99
TRPS1-202ENST00000395713 LRP1BQ9NZR2 4599 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 IGKV1D-37A0A075B6S9 117 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 IGHV3OR16-8A0A075B7F1 116 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 IRGMA1A4Y4 181 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 TMEM256-PLSCR3K7ERE1 68 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 SLC25A20O43772 301 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 NAPSAO96009 420 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 HRASP01112 189 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 KRASP01116 189 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 MT-ND4LP03901 98 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 GPX1P07203 203 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 RPL27AP46776 148 aaKnown RBP2.6□□□□□ -1.99
TRPS1-202ENST00000395713 TMBIM6P55061 237 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 TAS2R20P59543 309 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 C10orf55Q5SWW7 151 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 Q8NDZ9 215 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 SMCR5Q8TEV8 140 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 SCRT1Q9BWW7 348 aa2.6□□□□□ -1.99
TRPS1-202ENST00000395713 MRPL32Q9BYC8 188 aaKnown RBP2.6□□□□□ -1.99
TRPS1-202ENST00000395713 MRPL16Q9NX20 251 aaKnown RBP2.6□□□□□ -1.99
TRPS1-202ENST00000395713 NBDYA0A0U1RRE5 68 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 LOC100130705A0A1B0GUX0 176 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 MEIS3P1A6NDR6 274 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 OR2T8A6NH00 312 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 E7EUB6 86 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 CORTO00230 105 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 NDUFA4O00483 81 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 NCR2O95944 276 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 SPART-AS1P0CW21 52 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 SAA1P0DJI8 122 aaPredicted RBP2.59□□□□□ -1.99
TRPS1-202ENST00000395713 CRHBPP24387 322 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 RAB5CP51148 216 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 DEFB131AP59861 70 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 QRFPP83859 136 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 SDIM1Q6ZPB5 146 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 LYPD1Q8N2G4 141 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 RNF182Q8N6D2 247 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 VSTM2AQ8TAG5 236 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 DEDD2Q8WXF8 326 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 TMEM14BQ9NUH8 114 aa2.59□□□□□ -1.99
TRPS1-202ENST00000395713 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -2
TRPS1-202ENST00000395713 APOBP04114 4563 aaKnown RBP2.59□□□□□ -2
TRPS1-202ENST00000395713 TRAV14DV4A0A0A6YYC5 116 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 TCRBV3S1A0A5B6 114 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 F6UZH7 168 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 CXCL1P09341 107 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 HTN3P15516 51 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 FOXA3P55318 350 aaPredicted RBP2.58□□□□□ -2
TRPS1-202ENST00000395713 FXYD7P58549 80 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 YPEL3P61236 119 aaPredicted RBP2.58□□□□□ -2
TRPS1-202ENST00000395713 HIST1H4AP62805 103 aaKnown RBP2.58□□□□□ -2
TRPS1-202ENST00000395713 MSMO1Q15800 293 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 KLK9Q2XQG4 91 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 Q5VSD8 79 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 TMEM167AQ8TBQ9 72 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 HIST1H2BAQ96A08 127 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 MGLLQ99685 303 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 GINS4Q9BRT9 223 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 SMDT1Q9H4I9 107 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 KLK9Q9UKQ9 250 aa2.58□□□□□ -2
TRPS1-202ENST00000395713 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 TRBV6-7A0A0A0MS04 114 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 A6NED7 52 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 GGTLC3B5MD39 225 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 S100A8P05109 93 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 LGALS3P17931 250 aaKnown RBP2.57□□□□□ -2
TRPS1-202ENST00000395713 SDC2P34741 201 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 CCL18P55774 89 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 NEDD8Q15843 81 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 MIAQ16674 131 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 Q56UQ5 140 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 TMEM69Q5SWH9 247 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 XAF1Q6GPH4 301 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 IGFL1Q6UW32 110 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 LINC00305Q7Z4B0 112 aa2.57□□□□□ -2
TRPS1-202ENST00000395713 C15orf53Q8NAA6 179 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms