RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
TRPS1-202ENST00000395713 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
TRPS1-202ENST00000395713 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
TRPS1-202ENST00000395713 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
TRPS1-202ENST00000395713 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
TRPS1-202ENST00000395713 FOXD1Q16676 465 aa17.02■□□□□ 0.32
TRPS1-202ENST00000395713 ADRA2BP18089 450 aa16.66■□□□□ 0.26
TRPS1-202ENST00000395713 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
TRPS1-202ENST00000395713 PIAS4Q8N2W9 510 aaPredicted RBP16.11■□□□□ 0.17
TRPS1-202ENST00000395713 KCNA4P22459 653 aa15.59■□□□□ 0.09
TRPS1-202ENST00000395713 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
TRPS1-202ENST00000395713 MSH5O43196 834 aa15.52■□□□□ 0.08
TRPS1-202ENST00000395713 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
TRPS1-202ENST00000395713 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
TRPS1-202ENST00000395713 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
TRPS1-202ENST00000395713 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
TRPS1-202ENST00000395713 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
TRPS1-202ENST00000395713 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
TRPS1-202ENST00000395713 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
TRPS1-202ENST00000395713 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
TRPS1-202ENST00000395713 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
TRPS1-202ENST00000395713 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
TRPS1-202ENST00000395713 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
TRPS1-202ENST00000395713 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
TRPS1-202ENST00000395713 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
TRPS1-202ENST00000395713 ZBTB22O15209 634 aa14.36□□□□□ -0.11
TRPS1-202ENST00000395713 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
TRPS1-202ENST00000395713 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
TRPS1-202ENST00000395713 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
TRPS1-202ENST00000395713 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
TRPS1-202ENST00000395713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRPS1-202ENST00000395713 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
TRPS1-202ENST00000395713 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
TRPS1-202ENST00000395713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
TRPS1-202ENST00000395713 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
TRPS1-202ENST00000395713 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
TRPS1-202ENST00000395713 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
TRPS1-202ENST00000395713 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
TRPS1-202ENST00000395713 APLP2Q06481 763 aa13.34□□□□□ -0.27
TRPS1-202ENST00000395713 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
TRPS1-202ENST00000395713 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
TRPS1-202ENST00000395713 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
TRPS1-202ENST00000395713 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
TRPS1-202ENST00000395713 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
TRPS1-202ENST00000395713 CAPN15O75808 1086 aa13.13□□□□□ -0.31
TRPS1-202ENST00000395713 FKBP8Q14318 412 aa13.12□□□□□ -0.31
TRPS1-202ENST00000395713 POLA2Q14181 598 aa13.02□□□□□ -0.33
TRPS1-202ENST00000395713 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
TRPS1-202ENST00000395713 ABCB7O75027 752 aa12.93□□□□□ -0.34
TRPS1-202ENST00000395713 FBLN2P98095 1184 aa12.88□□□□□ -0.35
TRPS1-202ENST00000395713 DSG3P32926 999 aa12.83□□□□□ -0.36
TRPS1-202ENST00000395713 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
TRPS1-202ENST00000395713 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
TRPS1-202ENST00000395713 PROM2Q8N271 834 aa12.6□□□□□ -0.39
TRPS1-202ENST00000395713 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
TRPS1-202ENST00000395713 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
TRPS1-202ENST00000395713 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
TRPS1-202ENST00000395713 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
TRPS1-202ENST00000395713 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
TRPS1-202ENST00000395713 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
TRPS1-202ENST00000395713 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
TRPS1-202ENST00000395713 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
TRPS1-202ENST00000395713 SSUH2Q9Y2M2 353 aa12.42□□□□□ -0.42
TRPS1-202ENST00000395713 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
TRPS1-202ENST00000395713 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRPS1-202ENST00000395713 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
TRPS1-202ENST00000395713 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
TRPS1-202ENST00000395713 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
TRPS1-202ENST00000395713 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
TRPS1-202ENST00000395713 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
TRPS1-202ENST00000395713 MIER1Q8N108 512 aa12.1□□□□□ -0.47
TRPS1-202ENST00000395713 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
TRPS1-202ENST00000395713 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
TRPS1-202ENST00000395713 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
TRPS1-202ENST00000395713 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
TRPS1-202ENST00000395713 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
TRPS1-202ENST00000395713 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
TRPS1-202ENST00000395713 PKD2Q13563 968 aa11.96□□□□□ -0.49
TRPS1-202ENST00000395713 POTEHQ6S545 545 aa11.95□□□□□ -0.5
TRPS1-202ENST00000395713 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
TRPS1-202ENST00000395713 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
TRPS1-202ENST00000395713 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
TRPS1-202ENST00000395713 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
TRPS1-202ENST00000395713 ECM2O94769 699 aaPredicted RBP11.82□□□□□ -0.52
TRPS1-202ENST00000395713 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
TRPS1-202ENST00000395713 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
TRPS1-202ENST00000395713 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
TRPS1-202ENST00000395713 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
TRPS1-202ENST00000395713 NUBP1P53384 320 aa11.75□□□□□ -0.53
TRPS1-202ENST00000395713 RGL2O15211 777 aa11.71□□□□□ -0.53
TRPS1-202ENST00000395713 GSE1Q14687 1217 aa11.69□□□□□ -0.54
TRPS1-202ENST00000395713 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
TRPS1-202ENST00000395713 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
TRPS1-202ENST00000395713 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRPS1-202ENST00000395713 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
TRPS1-202ENST00000395713 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
TRPS1-202ENST00000395713 FAM212AQ96EL1 285 aa11.63□□□□□ -0.55
TRPS1-202ENST00000395713 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
TRPS1-202ENST00000395713 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRPS1-202ENST00000395713 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms