RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 FAM223BA6NKX1 122 aa8.5□□□□□ -1.05
RAPGEF3-202ENST00000395358 CLEC19AQ6UXS0 136 aa8.5□□□□□ -1.05
RAPGEF3-202ENST00000395358 ASPMQ8IZT6 3477 aa8.5□□□□□ -1.05
RAPGEF3-202ENST00000395358 F8WEM9 126 aa8.5□□□□□ -1.05
RAPGEF3-202ENST00000395358 C2orf48Q96LS8 159 aa8.5□□□□□ -1.05
RAPGEF3-202ENST00000395358 NBEAQ8NFP9 2946 aa8.5□□□□□ -1.05
RAPGEF3-202ENST00000395358 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 H3BUX3 64 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 PAX4O43316 350 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 LINC00158P58513 81 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 SNRPD3P62318 126 aaKnown RBP8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 Q6JHZ5 121 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 ABCA2Q9BZC7 2435 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 FLNBO75369 2602 aaKnown RBP8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 IGHV1OR15-1A0A075B7D0 117 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 Q9H8V8 135 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 F6UB75 175 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 I3L2K1 104 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 GNRH2O43555 120 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 BUB3O43684 328 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 LINC01561Q8N1V8 128 aa8.49□□□□□ -1.05
RAPGEF3-202ENST00000395358 CGB3P0DN86 165 aa8.48□□□□□ -1.05
RAPGEF3-202ENST00000395358 CGB7P0DN87 165 aa8.48□□□□□ -1.05
RAPGEF3-202ENST00000395358 UPK3BQ9BT76 320 aa8.48□□□□□ -1.05
RAPGEF3-202ENST00000395358 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
RAPGEF3-202ENST00000395358 IGHV3-73A0A0B4J1V6 119 aa8.48□□□□□ -1.05
RAPGEF3-202ENST00000395358 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
RAPGEF3-202ENST00000395358 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 LAMTOR3Q9UHA4 124 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 K7EIM0 57 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 FHL2Q14192 279 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 Q5XG85 94 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 CNFNQ9BYD5 112 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 LINC00574Q9H8X3 128 aa8.47□□□□□ -1.05
RAPGEF3-202ENST00000395358 LECT2O14960 151 aa8.46□□□□□ -1.05
RAPGEF3-202ENST00000395358 C5orf38Q86SI9 138 aa8.46□□□□□ -1.05
RAPGEF3-202ENST00000395358 HECTD1Q9ULT8 2610 aa8.46□□□□□ -1.05
RAPGEF3-202ENST00000395358 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
RAPGEF3-202ENST00000395358 SUMO4Q6EEV6 95 aa8.46□□□□□ -1.06
RAPGEF3-202ENST00000395358 ANKRD17O75179 2603 aaKnown RBP8.46□□□□□ -1.06
RAPGEF3-202ENST00000395358 TRAV13-2A0A0B4J235 113 aa8.46□□□□□ -1.06
RAPGEF3-202ENST00000395358 C9orf139Q6ZV77 190 aa8.46□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 HILS1P60008 231 aa8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 A8MZ25 164 aa8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 NCR3O14931 201 aa8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGLV1-47P01700 117 aa8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
RAPGEF3-202ENST00000395358 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 TRBV7-6A0A0J9YX20 115 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGLV2-23P01705 113 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 C11orf21Q9P2W6 132 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 ORMDL1Q9P0S3 153 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 ZNF580Q9UK33 172 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 ADGRG4Q8IZF6 3080 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGHV4-38-2P0DP08 117 aa8.44□□□□□ -1.06
RAPGEF3-202ENST00000395358 SS18Q15532 418 aa8.43□□□□□ -1.06
RAPGEF3-202ENST00000395358 LINC00846Q9NV44 126 aa8.43□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
RAPGEF3-202ENST00000395358 BLCAPP62952 87 aa8.43□□□□□ -1.06
RAPGEF3-202ENST00000395358 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
RAPGEF3-202ENST00000395358 SPTSSBQ8NFR3 76 aa8.42□□□□□ -1.06
RAPGEF3-202ENST00000395358 DYNLRB2Q8TF09 96 aa8.42□□□□□ -1.06
RAPGEF3-202ENST00000395358 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
RAPGEF3-202ENST00000395358 CYSTM1Q9H1C7 97 aa8.42□□□□□ -1.06
RAPGEF3-202ENST00000395358 WNK1Q9H4A3 2382 aa8.42□□□□□ -1.06
RAPGEF3-202ENST00000395358 DEFB112Q30KQ8 113 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 RMI2Q96E14 147 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 MTORP42345 2549 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 OXTP01178 125 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 FAM19A1Q7Z5A9 133 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 ATMQ13315 3056 aa8.41□□□□□ -1.06
RAPGEF3-202ENST00000395358 IGHV7-4-1A0A0J9YVY3 117 aa8.4□□□□□ -1.06
RAPGEF3-202ENST00000395358 SLPIP03973 132 aa8.4□□□□□ -1.06
RAPGEF3-202ENST00000395358 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.06
RAPGEF3-202ENST00000395358 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
RAPGEF3-202ENST00000395358 LINC00474Q9P2X8 69 aa8.4□□□□□ -1.06
RAPGEF3-202ENST00000395358 H0YGX0 51 aa8.4□□□□□ -1.07
RAPGEF3-202ENST00000395358 HIST2H2BDQ6DRA6 164 aa8.4□□□□□ -1.07
RAPGEF3-202ENST00000395358 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.07
RAPGEF3-202ENST00000395358 TRBV27A0A0K0K1C4 114 aa8.39□□□□□ -1.07
RAPGEF3-202ENST00000395358 ATP5EP2Q5VTU8 51 aa8.39□□□□□ -1.07
RAPGEF3-202ENST00000395358 CFAP46Q8IYW2 2715 aa8.39□□□□□ -1.07
RAPGEF3-202ENST00000395358 CFAP47Q6ZTR5 3102 aa8.39□□□□□ -1.07
RAPGEF3-202ENST00000395358 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
RAPGEF3-202ENST00000395358 RAI1Q7Z5J4 1906 aaPredicted RBP8.38□□□□□ -1.07
RAPGEF3-202ENST00000395358 LRCOL1A6NCL2 159 aa8.38□□□□□ -1.07
RAPGEF3-202ENST00000395358 ODF3BA8MYP8 253 aa8.38□□□□□ -1.07
RAPGEF3-202ENST00000395358 UBE2L6O14933 153 aa8.38□□□□□ -1.07
RAPGEF3-202ENST00000395358 NDUFC1O43677 76 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms