RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 FHL2Q14192 279 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 CSDC2Q9Y534 153 aaKnown RBP14.23□□□□□ -0.13
PTPN11-202ENST00000392597 DNHD1Q96M86 4753 aa14.22□□□□□ -0.13
PTPN11-202ENST00000392597 TINCRA0A1B0GVN0 87 aa14.22□□□□□ -0.13
PTPN11-202ENST00000392597 Q6ZUT4 128 aa14.22□□□□□ -0.13
PTPN11-202ENST00000392597 LEPROTO15243 131 aa14.21□□□□□ -0.13
PTPN11-202ENST00000392597 NTM-AS1Q6ZSK4 140 aa14.21□□□□□ -0.13
PTPN11-202ENST00000392597 SBSPONQ8IVN8 264 aa14.21□□□□□ -0.13
PTPN11-202ENST00000392597 J3QQQ9 107 aa14.21□□□□□ -0.14
PTPN11-202ENST00000392597 FXYD2P54710 66 aa14.21□□□□□ -0.14
PTPN11-202ENST00000392597 HIST1H4GQ99525 98 aa14.21□□□□□ -0.14
PTPN11-202ENST00000392597 DGAT2L7PQ6IED9 249 aa14.2□□□□□ -0.14
PTPN11-202ENST00000392597 TSPEAR-AS2P59090 65 aa14.19□□□□□ -0.14
PTPN11-202ENST00000392597 SCGB1D4Q6XE38 83 aa14.19□□□□□ -0.14
PTPN11-202ENST00000392597 PLEKHB2Q96CS7 222 aa14.19□□□□□ -0.14
PTPN11-202ENST00000392597 LYRM9A8MSI8 78 aa14.18□□□□□ -0.14
PTPN11-202ENST00000392597 LGALS3P17931 250 aaKnown RBP14.18□□□□□ -0.14
PTPN11-202ENST00000392597 H7C423 109 aa14.18□□□□□ -0.14
PTPN11-202ENST00000392597 LINC00694P0DN24 101 aa14.18□□□□□ -0.14
PTPN11-202ENST00000392597 UBE2D1P51668 147 aa14.18□□□□□ -0.14
PTPN11-202ENST00000392597 PTTG1IPP53801 180 aa14.18□□□□□ -0.14
PTPN11-202ENST00000392597 RNASE13Q5GAN3 156 aaKnown RBP14.18□□□□□ -0.14
PTPN11-202ENST00000392597 SMIM13P0DJ93 91 aa14.17□□□□□ -0.14
PTPN11-202ENST00000392597 DEFB130BP0DP73 79 aa14.17□□□□□ -0.14
PTPN11-202ENST00000392597 DEFB130AP0DP74 79 aa14.17□□□□□ -0.14
PTPN11-202ENST00000392597 UBE2V1Q13404 147 aa14.17□□□□□ -0.14
PTPN11-202ENST00000392597 TMEM243Q9BU79 118 aa14.17□□□□□ -0.14
PTPN11-202ENST00000392597 C9orf118A6NHY6 69 aa14.16□□□□□ -0.14
PTPN11-202ENST00000392597 VAMP3Q15836 100 aa14.16□□□□□ -0.14
PTPN11-202ENST00000392597 LOC100131303A0A0U1RQF7 123 aa14.16□□□□□ -0.14
PTPN11-202ENST00000392597 TIRAPP58753 221 aa14.16□□□□□ -0.14
PTPN11-202ENST00000392597 DEFB135Q30KP9 77 aa14.16□□□□□ -0.14
PTPN11-202ENST00000392597 A0A0J9YY99 117 aa14.15□□□□□ -0.14
PTPN11-202ENST00000392597 K7EP13 123 aa14.15□□□□□ -0.14
PTPN11-202ENST00000392597 CMYA5Q8N3K9 4069 aa14.15□□□□□ -0.14
PTPN11-202ENST00000392597 FAM19A3Q7Z5A8 133 aa14.14□□□□□ -0.15
PTPN11-202ENST00000392597 OR5A1Q8NGJ0 315 aa14.14□□□□□ -0.15
PTPN11-202ENST00000392597 GEMIN7Q9H840 131 aaKnown RBP14.14□□□□□ -0.15
PTPN11-202ENST00000392597 SPANXB1Q9NS25 103 aaPredicted RBP14.14□□□□□ -0.15
PTPN11-202ENST00000392597 IGLV5-45A0A087WSX0 123 aa14.13□□□□□ -0.15
PTPN11-202ENST00000392597 UBE2L6O14933 153 aa14.13□□□□□ -0.15
PTPN11-202ENST00000392597 FAM222AQ5U5X8 452 aa14.13□□□□□ -0.15
PTPN11-202ENST00000392597 NHP2Q9NX24 153 aaKnown RBP14.12□□□□□ -0.15
PTPN11-202ENST00000392597 NBEAL2Q6ZNJ1 2754 aa14.12□□□□□ -0.15
PTPN11-202ENST00000392597 IGHV1-58A0A0C4DH39 117 aa14.12□□□□□ -0.15
PTPN11-202ENST00000392597 IGHV3-30-3P0DP02 117 aa14.12□□□□□ -0.15
PTPN11-202ENST00000392597 IGHV4-30-4P0DP06 118 aa14.12□□□□□ -0.15
PTPN11-202ENST00000392597 MIFP14174 115 aa14.12□□□□□ -0.15
PTPN11-202ENST00000392597 CDC42SE2Q9NRR3 84 aa14.12□□□□□ -0.15
PTPN11-202ENST00000392597 PKD1L1Q8TDX9 2849 aa14.11□□□□□ -0.15
PTPN11-202ENST00000392597 HERVK_113P63121 156 aa14.11□□□□□ -0.15
PTPN11-202ENST00000392597 SRSF9Q13242 221 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTPN11-202ENST00000392597 AMMECR1LQ6DCA0 310 aa14.11□□□□□ -0.15
PTPN11-202ENST00000392597 TMEM101Q96IK0 257 aa14.11□□□□□ -0.15
PTPN11-202ENST00000392597 TRBV6-8A0A0A6YYG3 113 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 IGHV4-28A0A0C4DH34 117 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 A0A1B0GWB2 263 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 CCL25O15444 150 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 VSIG2Q96IQ7 327 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 PRO0255Q9UI72 69 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 TMEM238LA0A1B0GVL6 79 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 A6NJY4 79 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 RAB37Q96AX2 223 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 RNF183Q96D59 192 aa14.1□□□□□ -0.15
PTPN11-202ENST00000392597 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
PTPN11-202ENST00000392597 Q8NAQ8 132 aa14.09□□□□□ -0.15
PTPN11-202ENST00000392597 H3BUT2 72 aa14.08□□□□□ -0.16
PTPN11-202ENST00000392597 C12orf74Q32Q52 190 aa14.08□□□□□ -0.16
PTPN11-202ENST00000392597 LINC00242Q5T6M2 205 aa14.08□□□□□ -0.16
PTPN11-202ENST00000392597 GYPEP15421 78 aa14.07□□□□□ -0.16
PTPN11-202ENST00000392597 CDKN2A-AS1Q9UH64 79 aa14.07□□□□□ -0.16
PTPN11-202ENST00000392597 TRAV8-3A0A0A6YYJ7 113 aa14.06□□□□□ -0.16
PTPN11-202ENST00000392597 K7ERJ3 54 aa14.06□□□□□ -0.16
PTPN11-202ENST00000392597 A0A1W2PPM0 123 aa14.06□□□□□ -0.16
PTPN11-202ENST00000392597 SPINK8P0C7L1 97 aa14.06□□□□□ -0.16
PTPN11-202ENST00000392597 ATP6V0E2Q8NHE4 81 aa14.06□□□□□ -0.16
PTPN11-202ENST00000392597 MGAM2Q2M2H8 2515 aa14.05□□□□□ -0.16
PTPN11-202ENST00000392597 IGHV3-30P01768 117 aa14.05□□□□□ -0.16
PTPN11-202ENST00000392597 IGHV3-30-5P0DP03 117 aa14.05□□□□□ -0.16
PTPN11-202ENST00000392597 EGFEM1PQ0D2K5 195 aa14.05□□□□□ -0.16
PTPN11-202ENST00000392597 C10orf126Q8N4M7 172 aa14.05□□□□□ -0.16
PTPN11-202ENST00000392597 DAD1P61803 113 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 OXLD1Q5BKU9 147 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 SAMD5Q5TGI4 173 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 A8MZ25 164 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 TMEM238C9JI98 176 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 COX6A2Q02221 97 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 ZFAND6Q6FIF0 208 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 GTF2H5Q6ZYL4 71 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 NDUFA12Q9UI09 145 aa14.04□□□□□ -0.16
PTPN11-202ENST00000392597 TRAV13-1A0A0B4J241 112 aa14.03□□□□□ -0.16
PTPN11-202ENST00000392597 IGLV5-39A0A0G2JS06 123 aa14.03□□□□□ -0.16
PTPN11-202ENST00000392597 A0A0J9YXY3 114 aa14.03□□□□□ -0.16
PTPN11-202ENST00000392597 PAX4O43316 350 aa14.03□□□□□ -0.16
PTPN11-202ENST00000392597 CHCHD5Q9BSY4 110 aa14.03□□□□□ -0.16
PTPN11-202ENST00000392597 DEFB4AO15263 64 aa14.02□□□□□ -0.16
PTPN11-202ENST00000392597 FABP2P12104 132 aa14.02□□□□□ -0.16
PTPN11-202ENST00000392597 GAGE6Q13070 117 aa14.02□□□□□ -0.16
PTPN11-202ENST00000392597 GAGE10A6NGK3 116 aa14.01□□□□□ -0.17
PTPN11-202ENST00000392597 SPART-AS1P0CW21 52 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms