RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 TRBV7-7A0A0K0K1E9 115 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 FAM223BA6NKX1 122 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 SYS1-DBNDD2H3BUS1 97 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 H7BZZ5 65 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 K7EIL1 84 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 UQCR11O14957 56 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 NMBP08949 121 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 GCHFRP30047 84 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 PMCHL1Q16048 86 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 TDRG1Q3Y452 100 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 SPINK9Q5DT21 86 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 C6orf52Q5T4I8 152 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 FAM223AQ8IWN6 122 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 SMIM4Q8WVI0 70 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 AMELXQ99217 191 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 HIGD1BQ9P298 99 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 OTOGLQ3ZCN5 2332 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 DNAJC13O75165 2243 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 ZNF236Q9UL36 1845 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 PRDM2Q13029 1718 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 ABCA3Q99758 1704 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 LRRC37A3O60309 1634 aa0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 PRDM15P57071 1507 aaPredicted RBP0.38□□□□□ -2.35
TRAJ3-201ENST00000390534 HELZ2Q9BYK8 2649 aaKnown RBP0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 LOC285556D6RIA3 1793 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 GOLGA4Q13439 2230 aaKnown RBP0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 TTC37Q6PGP7 1564 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 BAZ1AQ9NRL2 1556 aaPredicted RBP0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 GAPVD1Q14C86 1478 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 PXDNQ92626 1479 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 MLH3Q9UHC1 1453 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 RAPGEF2Q9Y4G8 1499 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 NAV3Q8IVL0 2385 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 TRBV25-1A0A075B6N4 114 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 UQCRHLA0A096LP55 91 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 A0A1B0GWA3 101 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 C7orf77A4D0Y5 90 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 ZNF815PA8K554 130 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 G3V318 75 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 K7EP34 96 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 CYB5AP00167 134 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 UQCRHP07919 91 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 PEA15Q15121 130 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 PSMG4Q5JS54 123 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 LCE1CQ5T751 118 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 LCE1BQ5T7P3 118 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 FDCSPQ8NFU4 85 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 S100A16Q96FQ6 103 aaKnown RBP0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 SPRR4Q96PI1 79 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 PRR15LQ9BU68 103 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 LINC00472Q9H8W2 130 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 PSENENQ9NZ42 101 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 AHCTF1Q8WYP5 2266 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 ANKRD26Q9UPS8 1709 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 HMGXB3Q12766 1538 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 TROQ12816 1431 aaPredicted RBP0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 CACNA1CQ13936 2221 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 KDM5AP29375 1690 aaKnown RBP0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 COL4A6Q14031 1691 aa0.37□□□□□ -2.35
TRAJ3-201ENST00000390534 SSC5DA1L4H1 1573 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 JMJD1CQ15652 2540 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 LAMA4Q16363 1823 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 SHANK2Q9UPX8 1470 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 KIAA1551Q9HCM1 1747 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 SHROOM2Q13796 1616 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 F8WEM9 126 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 MGPP08493 103 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 SAA2P0DJI9 122 aaPredicted RBP0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 ARL14EPLP0DKL9 152 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 FXYD6P3P58550 94 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 HAMPP81172 84 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 COX17Q14061 63 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 WFDC2Q14508 124 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 LCN9Q8WX39 176 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 PROK2Q9HC23 129 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 EDC4Q6P2E9 1401 aaKnown RBP0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 TET3O43151 1660 aa0.36□□□□□ -2.35
TRAJ3-201ENST00000390534 CHD1O14646 1710 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 IFT172Q9UG01 1749 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 MARF1Q9Y4F3 1742 aaKnown RBP0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 NRXN1Q9ULB1 1477 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 ZNF462Q96JM2 2506 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 PLIN4Q96Q06 1357 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 CDK13Q14004 1512 aaKnown RBP0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 TOPAZ1Q8N9V7 1692 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 A0A087WVE0 104 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 A0A0D9SG42 100 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 BCE1O60756 84 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 LEPROTL1O95214 131 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 ARMS2P0C7Q2 107 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 SMIM11AP58511 58 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 ETDBQ3ZM63 59 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 NMSQ5H8A3 153 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 C10orf113Q5VZT2 155 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 Q6JHZ5 121 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 KRTAP5-4Q6L8H1 288 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 ZNF720Q7Z2F6 126 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 SSBP3-AS1Q7Z2R9 100 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 UBE2DNLQ8IWF7 75 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 TMEM263Q8WUH6 116 aaKnown RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms