RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
PTPRN2-202ENST00000389416 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
PTPRN2-202ENST00000389416 UBE2BP63146 152 aa9.6□□□□□ -0.87
PTPRN2-202ENST00000389416 C12orf74Q32Q52 190 aa9.6□□□□□ -0.87
PTPRN2-202ENST00000389416 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 TRAV13-2A0A0B4J235 113 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 C9orf85Q96MD7 179 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 C9orf118A6NHY6 69 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 E9PLD3 99 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 F8WEM9 126 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 Q6ZVH6 145 aa9.59□□□□□ -0.87
PTPRN2-202ENST00000389416 LAMA1P25391 3075 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 OVOL2Q9BRP0 275 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 PRSS47A8MTI9 375 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 REG3AQ06141 175 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 TRBV6-8A0A0A6YYG3 113 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 A4D1N5 150 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 NDUFA1O15239 70 aa9.58□□□□□ -0.88
PTPRN2-202ENST00000389416 TRAV8-4A0A0B4J246 113 aa9.57□□□□□ -0.88
PTPRN2-202ENST00000389416 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
PTPRN2-202ENST00000389416 RETNQ9HD89 108 aa9.57□□□□□ -0.88
PTPRN2-202ENST00000389416 VCANP13611 3396 aa9.57□□□□□ -0.88
PTPRN2-202ENST00000389416 SOCS3O14543 225 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 TM2D2Q9BX73 214 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 IGHV1-58A0A0C4DH39 117 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 NRACQ8N912 160 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 IL17DQ8TAD2 202 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 CFC1BP0CG36 223 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 CFC1P0CG37 223 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
PTPRN2-202ENST00000389416 SPATA12Q7Z6I5 190 aa9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 KPRPQ5T749 579 aaPredicted RBP9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 H3BMG7 143 aa9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 ETDBQ3ZM63 59 aa9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 Q8N2B8 174 aa9.55□□□□□ -0.88
PTPRN2-202ENST00000389416 IFITM1P13164 125 aa9.54□□□□□ -0.88
PTPRN2-202ENST00000389416 FXYD2P54710 66 aa9.54□□□□□ -0.88
PTPRN2-202ENST00000389416 U3KQK5 164 aa9.54□□□□□ -0.88
PTPRN2-202ENST00000389416 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
PTPRN2-202ENST00000389416 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
PTPRN2-202ENST00000389416 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
PTPRN2-202ENST00000389416 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 COL27A1Q8IZC6 1860 aaPredicted RBP9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 TRAV10A0A0B4J240 114 aa9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 A0A1W2PPM0 123 aa9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 K7EP13 123 aa9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 POLR2KP53803 58 aaKnown RBP9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 RBX1P62877 108 aa9.53□□□□□ -0.88
PTPRN2-202ENST00000389416 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
PTPRN2-202ENST00000389416 TSHBP01222 138 aa9.52□□□□□ -0.89
PTPRN2-202ENST00000389416 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
PTPRN2-202ENST00000389416 CLUHP3Q96NS8 147 aa9.51□□□□□ -0.89
PTPRN2-202ENST00000389416 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 CITED1Q99966 193 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 MUC4Q99102 2169 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 IGLV2-18A0A075B6J9 118 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 CXCL5P42830 114 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 RNF183Q96D59 192 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 IGSF10Q6WRI0 2623 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 TIRAPP58753 221 aa9.5□□□□□ -0.89
PTPRN2-202ENST00000389416 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
PTPRN2-202ENST00000389416 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
PTPRN2-202ENST00000389416 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
PTPRN2-202ENST00000389416 DEFB105AQ8NG35 78 aa9.49□□□□□ -0.89
PTPRN2-202ENST00000389416 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
PTPRN2-202ENST00000389416 FSHBP01225 129 aa9.48□□□□□ -0.89
PTPRN2-202ENST00000389416 K7EP34 96 aa9.48□□□□□ -0.89
PTPRN2-202ENST00000389416 RNASE8Q8TDE3 154 aaKnown RBP9.48□□□□□ -0.89
PTPRN2-202ENST00000389416 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
PTPRN2-202ENST00000389416 NCR3O14931 201 aa9.48□□□□□ -0.89
PTPRN2-202ENST00000389416 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 SETXQ7Z333 2677 aaKnown RBP9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 HIST1H4AP62805 103 aaKnown RBP9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 CHD6Q8TD26 2715 aa9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 A8MZ25 164 aa9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 H7C423 109 aa9.47□□□□□ -0.89
PTPRN2-202ENST00000389416 KRTAP24-1Q3LI83 254 aa9.46□□□□□ -0.89
PTPRN2-202ENST00000389416 COX8CQ7Z4L0 72 aa9.46□□□□□ -0.89
PTPRN2-202ENST00000389416 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.89
PTPRN2-202ENST00000389416 UBE2D3P61077 147 aa9.46□□□□□ -0.9
PTPRN2-202ENST00000389416 UBE2D2P62837 147 aa9.46□□□□□ -0.9
PTPRN2-202ENST00000389416 PIK3CD-AS1Q5SR53 167 aa9.46□□□□□ -0.9
PTPRN2-202ENST00000389416 A0A0J9YXY3 114 aa9.46□□□□□ -0.9
PTPRN2-202ENST00000389416 LECT2O14960 151 aa9.46□□□□□ -0.9
PTPRN2-202ENST00000389416 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
PTPRN2-202ENST00000389416 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
PTPRN2-202ENST00000389416 G3V4G9 280 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms