RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 RNASE13Q5GAN3 156 aaKnown RBP10.74□□□□□ -0.69
SCFD2-201ENST00000388940 TLN2Q9Y4G6 2542 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
SCFD2-201ENST00000388940 LITAFQ99732 161 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 IGLV5-45A0A087WSX0 123 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 TRAV8-3A0A0A6YYJ7 113 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 B5MCH6 92 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 PSMB2P49721 201 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 HIST2H2BCQ6DN03 193 aa10.73□□□□□ -0.69
SCFD2-201ENST00000388940 DAZ2Q13117 558 aaKnown RBP10.72□□□□□ -0.69
SCFD2-201ENST00000388940 CHD6Q8TD26 2715 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 K7EQD1 137 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 EIF4EBP3O60516 100 aaPredicted RBP10.72□□□□□ -0.69
SCFD2-201ENST00000388940 IGLV1-51P01701 117 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 XGP55808 180 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
SCFD2-201ENST00000388940 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
SCFD2-201ENST00000388940 SPANXDQ9BXN6 97 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 SPANXCQ9NY87 97 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 NDUFA12Q9UI09 145 aa10.72□□□□□ -0.69
SCFD2-201ENST00000388940 IGHV3-33P01772 117 aa10.71□□□□□ -0.69
SCFD2-201ENST00000388940 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
SCFD2-201ENST00000388940 ZFAND6Q6FIF0 208 aa10.71□□□□□ -0.69
SCFD2-201ENST00000388940 FAM19A3Q7Z5A8 133 aa10.71□□□□□ -0.69
SCFD2-201ENST00000388940 DAZ4Q86SG3 579 aaKnown RBP10.71□□□□□ -0.69
SCFD2-201ENST00000388940 DAZ3Q9NR90 486 aaKnown RBP10.71□□□□□ -0.69
SCFD2-201ENST00000388940 CSDC2Q9Y534 153 aaKnown RBP10.71□□□□□ -0.69
SCFD2-201ENST00000388940 SONP18583 2426 aaKnown RBP10.71□□□□□ -0.7
SCFD2-201ENST00000388940 SMCPP49901 116 aaPredicted RBP10.7□□□□□ -0.7
SCFD2-201ENST00000388940 Q6ZTI0 123 aa10.7□□□□□ -0.7
SCFD2-201ENST00000388940 WNK1Q9H4A3 2382 aa10.7□□□□□ -0.7
SCFD2-201ENST00000388940 TCL1BO95988 128 aa10.7□□□□□ -0.7
SCFD2-201ENST00000388940 DGAT2L7PQ6IED9 249 aa10.7□□□□□ -0.7
SCFD2-201ENST00000388940 SMIM20Q8N5G0 67 aa10.7□□□□□ -0.7
SCFD2-201ENST00000388940 C19orf73Q9NVV2 129 aa10.7□□□□□ -0.7
SCFD2-201ENST00000388940 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
SCFD2-201ENST00000388940 FLNAP21333 2647 aaKnown RBP10.69□□□□□ -0.7
SCFD2-201ENST00000388940 TIMM17BO60830 172 aa10.69□□□□□ -0.7
SCFD2-201ENST00000388940 NDUFA7O95182 113 aa10.69□□□□□ -0.7
SCFD2-201ENST00000388940 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
SCFD2-201ENST00000388940 C16orf74Q96GX8 76 aa10.69□□□□□ -0.7
SCFD2-201ENST00000388940 ADARB2-AS1A8MUL3 147 aa10.68□□□□□ -0.7
SCFD2-201ENST00000388940 CDKN2A-AS1Q9UH64 79 aa10.68□□□□□ -0.7
SCFD2-201ENST00000388940 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
SCFD2-201ENST00000388940 HILS1P60008 231 aa10.68□□□□□ -0.7
SCFD2-201ENST00000388940 HERVK_113P63121 156 aa10.68□□□□□ -0.7
SCFD2-201ENST00000388940 NOP10Q9NPE3 64 aaKnown RBP10.68□□□□□ -0.7
SCFD2-201ENST00000388940 NBPF19A0A087WUL8 3843 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 PDZD2O15018 2839 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 GAGE7O76087 117 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 SCGB1C2P0DMR2 95 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 GAGE4Q13068 117 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 MIAQ16674 131 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 ADAMTSL4-AS1Q5T5F5 129 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
SCFD2-201ENST00000388940 PLA2G2AP14555 144 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 CSNK1G2-AS1Q8NCQ2 148 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 OVOL2Q9BRP0 275 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 TMEM262E9PQX1 116 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 NDUFA1O15239 70 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
SCFD2-201ENST00000388940 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
SCFD2-201ENST00000388940 A8MZ25 164 aa10.65□□□□□ -0.7
SCFD2-201ENST00000388940 J3QKU1 62 aa10.65□□□□□ -0.7
SCFD2-201ENST00000388940 NHLRC4P0CG21 123 aaPredicted RBP10.65□□□□□ -0.7
SCFD2-201ENST00000388940 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.65□□□□□ -0.7
SCFD2-201ENST00000388940 IFITM1P13164 125 aa10.65□□□□□ -0.71
SCFD2-201ENST00000388940 COX6A2Q02221 97 aa10.65□□□□□ -0.71
SCFD2-201ENST00000388940 M0QXV9 152 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 PRSS2P07478 247 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 CITED1Q99966 193 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 TENM4Q6N022 2769 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
SCFD2-201ENST00000388940 KMT2BQ9UMN6 2715 aaPredicted RBP10.63□□□□□ -0.71
SCFD2-201ENST00000388940 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
SCFD2-201ENST00000388940 CCDC168Q8NDH2 2452 aa10.63□□□□□ -0.71
SCFD2-201ENST00000388940 NF1P21359 2839 aa10.62□□□□□ -0.71
SCFD2-201ENST00000388940 H7C423 109 aa10.62□□□□□ -0.71
SCFD2-201ENST00000388940 TEN1Q86WV5 123 aa10.62□□□□□ -0.71
SCFD2-201ENST00000388940 TRGV2A0A075B6R0 118 aa10.61□□□□□ -0.71
SCFD2-201ENST00000388940 NDUFV3P56181 108 aaKnown RBP10.61□□□□□ -0.71
SCFD2-201ENST00000388940 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
SCFD2-201ENST00000388940 H7C2G1 150 aa10.6□□□□□ -0.71
SCFD2-201ENST00000388940 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
SCFD2-201ENST00000388940 Q1RN00 199 aa10.6□□□□□ -0.71
SCFD2-201ENST00000388940 Q6Q795 121 aa10.6□□□□□ -0.71
SCFD2-201ENST00000388940 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
SCFD2-201ENST00000388940 ANK3Q12955 4377 aaKnown RBP10.6□□□□□ -0.71
SCFD2-201ENST00000388940 SMIM1B2RUZ4 78 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms