RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TSPEAR-AS2P59090 65 aa13.63□□□□□ -0.23
GMDS-201ENST00000380805 Q6ZUT4 128 aa13.63□□□□□ -0.23
GMDS-201ENST00000380805 LEPROTO15243 131 aa13.62□□□□□ -0.23
GMDS-201ENST00000380805 GAGE12JA6NER3 117 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 J3QQQ9 107 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 GAGE4Q13068 117 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 GAGE5Q13069 117 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 UBE2V1Q13404 147 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 GAGE13Q4V321 117 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 C9orf118A6NHY6 69 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 APOC4P55056 127 aa13.61□□□□□ -0.23
GMDS-201ENST00000380805 TRGV4A0A0C4DH28 118 aa13.6□□□□□ -0.23
GMDS-201ENST00000380805 UBE2D1P51668 147 aa13.6□□□□□ -0.23
GMDS-201ENST00000380805 PLEKHB2Q96CS7 222 aa13.6□□□□□ -0.23
GMDS-201ENST00000380805 CMYA5Q8N3K9 4069 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 K7EP13 123 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 SMAGPQ0VAQ4 97 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 FAM19A3Q7Z5A8 133 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 OR5A1Q8NGJ0 315 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 HIST1H4GQ99525 98 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 DNHD1Q96M86 4753 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 IGLV5-45A0A087WSX0 123 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 A0A0J9YY99 117 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 H7C423 109 aa13.59□□□□□ -0.23
GMDS-201ENST00000380805 SPANXB1Q9NS25 103 aaPredicted RBP13.59□□□□□ -0.23
GMDS-201ENST00000380805 SMIM13P0DJ93 91 aa13.58□□□□□ -0.24
GMDS-201ENST00000380805 TIRAPP58753 221 aa13.58□□□□□ -0.24
GMDS-201ENST00000380805 A0A1B0GWB2 263 aa13.57□□□□□ -0.24
GMDS-201ENST00000380805 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
GMDS-201ENST00000380805 RNASE13Q5GAN3 156 aaKnown RBP13.57□□□□□ -0.24
GMDS-201ENST00000380805 SCGB1D4Q6XE38 83 aa13.57□□□□□ -0.24
GMDS-201ENST00000380805 LYRM9A8MSI8 78 aa13.56□□□□□ -0.24
GMDS-201ENST00000380805 CCL25O15444 150 aa13.56□□□□□ -0.24
GMDS-201ENST00000380805 PTTG1IPP53801 180 aa13.56□□□□□ -0.24
GMDS-201ENST00000380805 VAMP3Q15836 100 aa13.56□□□□□ -0.24
GMDS-201ENST00000380805 LOC100131303A0A0U1RQF7 123 aa13.56□□□□□ -0.24
GMDS-201ENST00000380805 DGAT2L7PQ6IED9 249 aa13.56□□□□□ -0.24
GMDS-201ENST00000380805 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
GMDS-201ENST00000380805 TMEM243Q9BU79 118 aa13.55□□□□□ -0.24
GMDS-201ENST00000380805 IGHV3-30-3P0DP02 117 aa13.54□□□□□ -0.24
GMDS-201ENST00000380805 PKD1L1Q8TDX9 2849 aa13.54□□□□□ -0.24
GMDS-201ENST00000380805 CDC42SE2Q9NRR3 84 aa13.53□□□□□ -0.24
GMDS-201ENST00000380805 NHP2Q9NX24 153 aaKnown RBP13.53□□□□□ -0.24
GMDS-201ENST00000380805 DEFB130BP0DP73 79 aa13.53□□□□□ -0.24
GMDS-201ENST00000380805 DEFB130AP0DP74 79 aa13.53□□□□□ -0.24
GMDS-201ENST00000380805 DEFB135Q30KP9 77 aa13.53□□□□□ -0.24
GMDS-201ENST00000380805 AMMECR1LQ6DCA0 310 aa13.53□□□□□ -0.24
GMDS-201ENST00000380805 VSIG2Q96IQ7 327 aa13.52□□□□□ -0.25
GMDS-201ENST00000380805 H3BUT2 72 aa13.51□□□□□ -0.25
GMDS-201ENST00000380805 MIFP14174 115 aa13.51□□□□□ -0.25
GMDS-201ENST00000380805 C12orf74Q32Q52 190 aa13.51□□□□□ -0.25
GMDS-201ENST00000380805 GEMIN7Q9H840 131 aaKnown RBP13.51□□□□□ -0.25
GMDS-201ENST00000380805 TRBV6-8A0A0A6YYG3 113 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 HERVK_113P63121 156 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 LINC00242Q5T6M2 205 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 FAM222AQ5U5X8 452 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 RAB37Q96AX2 223 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 A6NJY4 79 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 K7ERJ3 54 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 IGHV4-30-4P0DP06 118 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 Q8NAQ8 132 aa13.5□□□□□ -0.25
GMDS-201ENST00000380805 IGHV4-28A0A0C4DH34 117 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 A0A1W2PPM0 123 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 UBE2L6O14933 153 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 IGHV3-30P01768 117 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 IGHV3-30-5P0DP03 117 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 SRSF9Q13242 221 aaKnown RBP eCLIP13.49□□□□□ -0.256e-7■■■□□ 15.3
GMDS-201ENST00000380805 C10orf126Q8N4M7 172 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 RNF183Q96D59 192 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 PRO0255Q9UI72 69 aa13.49□□□□□ -0.25
GMDS-201ENST00000380805 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
GMDS-201ENST00000380805 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
GMDS-201ENST00000380805 TMEM101Q96IK0 257 aa13.48□□□□□ -0.25
GMDS-201ENST00000380805 SAMD5Q5TGI4 173 aa13.47□□□□□ -0.25
GMDS-201ENST00000380805 ZFAND6Q6FIF0 208 aa13.47□□□□□ -0.25
GMDS-201ENST00000380805 IGLV5-39A0A0G2JS06 123 aa13.46□□□□□ -0.25
GMDS-201ENST00000380805 A0A0J9YXY3 114 aa13.46□□□□□ -0.25
GMDS-201ENST00000380805 K7EP34 96 aa13.46□□□□□ -0.25
GMDS-201ENST00000380805 COX6A2Q02221 97 aa13.46□□□□□ -0.25
GMDS-201ENST00000380805 EGFEM1PQ0D2K5 195 aa13.46□□□□□ -0.25
GMDS-201ENST00000380805 A8MZ25 164 aa13.45□□□□□ -0.26
GMDS-201ENST00000380805 SPINK8P0C7L1 97 aa13.45□□□□□ -0.26
GMDS-201ENST00000380805 GTF2H5Q6ZYL4 71 aa13.45□□□□□ -0.26
GMDS-201ENST00000380805 IGLL5B9A064 214 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 TMEM238C9JI98 176 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 GYPEP15421 78 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 GAGE10A6NGK3 116 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 ATP6V0E2Q8NHE4 81 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 LITAFQ99732 161 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 NAA38Q9BRA0 125 aaKnown RBP13.44□□□□□ -0.26
GMDS-201ENST00000380805 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
GMDS-201ENST00000380805 FABP2P12104 132 aa13.43□□□□□ -0.26
GMDS-201ENST00000380805 TRAV13-1A0A0B4J241 112 aa13.41□□□□□ -0.26
GMDS-201ENST00000380805 SMIM1B2RUZ4 78 aa13.41□□□□□ -0.26
GMDS-201ENST00000380805 F5H768 121 aa13.41□□□□□ -0.26
GMDS-201ENST00000380805 NDUFA1O15239 70 aa13.41□□□□□ -0.26
GMDS-201ENST00000380805 KRTAP10-11P60412 298 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms