RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TRACP01848 142 aa9.43□□□□□ -0.9
DNMT3A-204ENST00000380756 C9orf85Q96MD7 179 aa9.43□□□□□ -0.9
DNMT3A-204ENST00000380756 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
DNMT3A-204ENST00000380756 DEFB114Q30KQ6 69 aa9.43□□□□□ -0.9
DNMT3A-204ENST00000380756 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
DNMT3A-204ENST00000380756 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
DNMT3A-204ENST00000380756 IGLV1-40P01703 118 aa9.42□□□□□ -0.9
DNMT3A-204ENST00000380756 CITED1Q99966 193 aa9.42□□□□□ -0.9
DNMT3A-204ENST00000380756 Q6YL49 198 aa9.42□□□□□ -0.9
DNMT3A-204ENST00000380756 Q9HAA7 133 aa9.42□□□□□ -0.9
DNMT3A-204ENST00000380756 RAI1Q7Z5J4 1906 aaPredicted RBP9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 IGLV2-18A0A075B6J9 118 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 A8MZ25 164 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 ESM1Q9NQ30 184 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 PTPRBP23467 1997 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 HIST2H2BDQ6DRA6 164 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 LINC00308Q8TCZ7 52 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 ACANP16112 2415 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
DNMT3A-204ENST00000380756 A0A1W2PPR1 153 aa9.4□□□□□ -0.9
DNMT3A-204ENST00000380756 LINC00643Q86TS7 51 aa9.4□□□□□ -0.9
DNMT3A-204ENST00000380756 SPANXCQ9NY87 97 aa9.4□□□□□ -0.9
DNMT3A-204ENST00000380756 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.91
DNMT3A-204ENST00000380756 TIRAPP58753 221 aa9.4□□□□□ -0.91
DNMT3A-204ENST00000380756 UBE2D1P51668 147 aa9.39□□□□□ -0.91
DNMT3A-204ENST00000380756 NKAPP1Q8N9T2 125 aa9.39□□□□□ -0.91
DNMT3A-204ENST00000380756 ATOX1O00244 68 aa9.39□□□□□ -0.91
DNMT3A-204ENST00000380756 NDUFA1O15239 70 aa9.39□□□□□ -0.91
DNMT3A-204ENST00000380756 A0A1B0GX51 115 aa9.38□□□□□ -0.91
DNMT3A-204ENST00000380756 ATP5G1P05496 136 aa9.38□□□□□ -0.91
DNMT3A-204ENST00000380756 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
DNMT3A-204ENST00000380756 PRM2P04554 102 aa9.38□□□□□ -0.91
DNMT3A-204ENST00000380756 F8WEM9 126 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 XGP55808 180 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 DNAJC9-AS1A6NH13 148 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 EDN2P20800 178 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 PRO0255Q9UI72 69 aa9.37□□□□□ -0.91
DNMT3A-204ENST00000380756 JMJD7-PLA2G4BH0Y9G9 81 aa9.36□□□□□ -0.91
DNMT3A-204ENST00000380756 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
DNMT3A-204ENST00000380756 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
DNMT3A-204ENST00000380756 AVPP01185 164 aa9.36□□□□□ -0.91
DNMT3A-204ENST00000380756 RBMY1FQ15415 496 aaKnown RBP9.36□□□□□ -0.91
DNMT3A-204ENST00000380756 SPART-AS1P0CW21 52 aa9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 TIMM17BO60830 172 aa9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 CXCL5P42830 114 aa9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 C9orf66Q5T8R8 295 aa9.35□□□□□ -0.91
DNMT3A-204ENST00000380756 DEFB4AO15263 64 aa9.34□□□□□ -0.91
DNMT3A-204ENST00000380756 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
DNMT3A-204ENST00000380756 DEFB135Q30KP9 77 aa9.34□□□□□ -0.91
DNMT3A-204ENST00000380756 ZNF702PQ9H963 129 aa9.34□□□□□ -0.91
DNMT3A-204ENST00000380756 SPAG11BQ08648 103 aa9.33□□□□□ -0.92
DNMT3A-204ENST00000380756 WFDC11Q8NEX6 87 aa9.33□□□□□ -0.92
DNMT3A-204ENST00000380756 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
DNMT3A-204ENST00000380756 LST1O00453 97 aa9.33□□□□□ -0.92
DNMT3A-204ENST00000380756 TRANK1O15050 2925 aa9.33□□□□□ -0.92
DNMT3A-204ENST00000380756 Q6ZSV7 163 aa9.33□□□□□ -0.92
DNMT3A-204ENST00000380756 UBE2D3P61077 147 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 UBE2D2P62837 147 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 NCR3O14931 201 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 PSCAO43653 123 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
DNMT3A-204ENST00000380756 C18orf65Q6ZTR6 163 aa9.31□□□□□ -0.92
DNMT3A-204ENST00000380756 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
DNMT3A-204ENST00000380756 UNC80Q8N2C7 3258 aa9.31□□□□□ -0.92
DNMT3A-204ENST00000380756 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
DNMT3A-204ENST00000380756 TMEM256-PLSCR3K7ERE1 68 aa9.31□□□□□ -0.92
DNMT3A-204ENST00000380756 CFAP54Q96N23 3096 aa9.3□□□□□ -0.92
DNMT3A-204ENST00000380756 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
DNMT3A-204ENST00000380756 TRBV6-4A0A1B0GX49 114 aa9.3□□□□□ -0.92
DNMT3A-204ENST00000380756 BRI3O95415 125 aa9.3□□□□□ -0.92
DNMT3A-204ENST00000380756 H7C423 109 aa9.29□□□□□ -0.92
DNMT3A-204ENST00000380756 PCSK5Q92824 1860 aa9.29□□□□□ -0.92
DNMT3A-204ENST00000380756 RBM3P98179 157 aaKnown RBP9.29□□□□□ -0.92
DNMT3A-204ENST00000380756 BBC3Q96PG8 261 aaPredicted RBP9.29□□□□□ -0.92
DNMT3A-204ENST00000380756 INAFM1C9JVW0 142 aa9.29□□□□□ -0.92
DNMT3A-204ENST00000380756 LINC00269Q8N2A0 174 aa9.29□□□□□ -0.92
DNMT3A-204ENST00000380756 DEFB105AQ8NG35 78 aa9.27□□□□□ -0.92
DNMT3A-204ENST00000380756 ZNF580Q9UK33 172 aa9.27□□□□□ -0.92
DNMT3A-204ENST00000380756 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
DNMT3A-204ENST00000380756 LINC01546A6NGU7 62 aa9.27□□□□□ -0.93
DNMT3A-204ENST00000380756 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.93
DNMT3A-204ENST00000380756 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
DNMT3A-204ENST00000380756 SLPIP03973 132 aa9.26□□□□□ -0.93
DNMT3A-204ENST00000380756 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
DNMT3A-204ENST00000380756 hADV29S1A0JD25 119 aa9.26□□□□□ -0.93
DNMT3A-204ENST00000380756 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
DNMT3A-204ENST00000380756 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
DNMT3A-204ENST00000380756 UQCRQO14949 82 aa9.25□□□□□ -0.93
DNMT3A-204ENST00000380756 REG3AQ06141 175 aa9.25□□□□□ -0.93
DNMT3A-204ENST00000380756 ANKRD17O75179 2603 aaKnown RBP9.25□□□□□ -0.93
DNMT3A-204ENST00000380756 MRAPQ8TCY5 172 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms