RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1
NPHP4-202ENST00000378161 CFHR3Q02985 330 aa8.77□□□□□ -1
NPHP4-202ENST00000378161 G3V318 75 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 A0A087WZ39 114 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 LRCOL1A6NCL2 159 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 UBE2AP49459 152 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 SUMO4Q6EEV6 95 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 SND1-IT1Q9HBX3 110 aa8.77□□□□□ -1.01
NPHP4-202ENST00000378161 IGLV11-55A0A075B6I3 123 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 BCE1O60756 84 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 CEP192Q8TEP8 1941 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 COL5A1P20908 1838 aaPredicted RBP8.76□□□□□ -1.01
NPHP4-202ENST00000378161 IGKV3OR2-268A0A0C4DH90 116 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 LY6LH3BQJ8 138 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 LENEPQ9Y5L5 61 aa8.76□□□□□ -1.01
NPHP4-202ENST00000378161 H3BUX3 64 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 APOC4P55056 127 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 NPBQ8NG41 125 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 BPESC1Q9GZL8 116 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 NAV3Q8IVL0 2385 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 CCDC168Q8NDH2 2452 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 TMEM256-PLSCR3K7ERE1 68 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 RPL28P46779 137 aaKnown RBP8.75□□□□□ -1.01
NPHP4-202ENST00000378161 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 BRD3OSQ6XYD6 125 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
NPHP4-202ENST00000378161 ANKRD11Q6UB99 2663 aaPredicted RBP8.75□□□□□ -1.01
NPHP4-202ENST00000378161 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
NPHP4-202ENST00000378161 PRAC2D3DTV9 90 aa8.74□□□□□ -1.01
NPHP4-202ENST00000378161 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
NPHP4-202ENST00000378161 H7BZZ5 65 aa8.74□□□□□ -1.01
NPHP4-202ENST00000378161 OVOL3O00110 214 aa8.74□□□□□ -1.01
NPHP4-202ENST00000378161 CTSGP08311 255 aa8.73□□□□□ -1.01
NPHP4-202ENST00000378161 NDUFA4O00483 81 aa8.73□□□□□ -1.01
NPHP4-202ENST00000378161 OXLD1Q5BKU9 147 aa8.73□□□□□ -1.01
NPHP4-202ENST00000378161 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
NPHP4-202ENST00000378161 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
NPHP4-202ENST00000378161 FSTL3O95633 263 aa8.73□□□□□ -1.01
NPHP4-202ENST00000378161 ITLN2Q8WWU7 325 aaPredicted RBP8.73□□□□□ -1.01
NPHP4-202ENST00000378161 GNRH2O43555 120 aa8.72□□□□□ -1.01
NPHP4-202ENST00000378161 NREPQ16612 68 aa8.72□□□□□ -1.01
NPHP4-202ENST00000378161 A6NED7 52 aa8.72□□□□□ -1.01
NPHP4-202ENST00000378161 J3QKU1 62 aa8.71□□□□□ -1.01
NPHP4-202ENST00000378161 PRYO14603 147 aa8.71□□□□□ -1.01
NPHP4-202ENST00000378161 SLPIP03973 132 aa8.71□□□□□ -1.01
NPHP4-202ENST00000378161 GNLYP22749 145 aa8.71□□□□□ -1.01
NPHP4-202ENST00000378161 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.01
NPHP4-202ENST00000378161 MIR7-3HGQ8N6C7 128 aa8.71□□□□□ -1.01
NPHP4-202ENST00000378161 IGHV7-81A0A0B4J1V7 117 aa8.71□□□□□ -1.02
NPHP4-202ENST00000378161 H3BS24 57 aa8.71□□□□□ -1.02
NPHP4-202ENST00000378161 Q8N6K4 173 aa8.71□□□□□ -1.02
NPHP4-202ENST00000378161 DNAH14Q0VDD8 3507 aa8.7□□□□□ -1.02
NPHP4-202ENST00000378161 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
NPHP4-202ENST00000378161 RUSC1-AS1Q66K80 236 aa8.7□□□□□ -1.02
NPHP4-202ENST00000378161 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
NPHP4-202ENST00000378161 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
NPHP4-202ENST00000378161 IGLV4-3A0A075B6K6 122 aa8.69□□□□□ -1.02
NPHP4-202ENST00000378161 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
NPHP4-202ENST00000378161 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
NPHP4-202ENST00000378161 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
NPHP4-202ENST00000378161 B4DSR2 109 aa8.68□□□□□ -1.02
NPHP4-202ENST00000378161 NDUFA1O15239 70 aa8.68□□□□□ -1.02
NPHP4-202ENST00000378161 PDE6GP18545 87 aa8.68□□□□□ -1.02
NPHP4-202ENST00000378161 BEAN1Q3B7T3 259 aa8.68□□□□□ -1.02
NPHP4-202ENST00000378161 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
NPHP4-202ENST00000378161 PRRC2AP48634 2157 aaKnown RBP8.68□□□□□ -1.02
NPHP4-202ENST00000378161 IGHV7-4-1A0A0J9YVY3 117 aa8.67□□□□□ -1.02
NPHP4-202ENST00000378161 Q9UF83 564 aa8.67□□□□□ -1.02
NPHP4-202ENST00000378161 COX8CQ7Z4L0 72 aa8.67□□□□□ -1.02
NPHP4-202ENST00000378161 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
NPHP4-202ENST00000378161 TRANK1O15050 2925 aa8.67□□□□□ -1.02
NPHP4-202ENST00000378161 SCXQ7RTU7 201 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 Q8N9W7 124 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 TET2Q6N021 2002 aaPredicted RBP8.66□□□□□ -1.02
NPHP4-202ENST00000378161 Q8N3U1 123 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 DSCR9P59020 149 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 TRGV2A0A075B6R0 118 aa8.66□□□□□ -1.02
NPHP4-202ENST00000378161 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
NPHP4-202ENST00000378161 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
NPHP4-202ENST00000378161 H3BUA1 57 aa8.65□□□□□ -1.02
NPHP4-202ENST00000378161 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
NPHP4-202ENST00000378161 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
NPHP4-202ENST00000378161 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.02
NPHP4-202ENST00000378161 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.03
NPHP4-202ENST00000378161 TRBV10-1A0A0K0K1A3 114 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 BPY2O14599 106 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 ZNF580Q9UK33 172 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 NAV2Q8IVL1 2488 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 USP34Q70CQ2 3546 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
NPHP4-202ENST00000378161 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 A0A087WW49 117 aa8.64□□□□□ -1.03
NPHP4-202ENST00000378161 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
NPHP4-202ENST00000378161 CFAP54Q96N23 3096 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms