RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TRBV10-2A0A0K0K1G8 114 aa10.08□□□□□ -0.8
C9orf47-203ENST00000375851 HILS1P60008 231 aa10.08□□□□□ -0.8
C9orf47-203ENST00000375851 CPAMD8Q8IZJ3 1885 aa10.08□□□□□ -0.8
C9orf47-203ENST00000375851 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 UTRNP46939 3433 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 TRBV6-4A0A1B0GX49 114 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 PRM2P04554 102 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 ACANP16112 2415 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 H3BT86 120 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 PTH2Q96A98 100 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 Q8N976 141 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
C9orf47-203ENST00000375851 FUSP35637 526 aaKnown RBP eCLIP10.06□□□□□ -0.8
C9orf47-203ENST00000375851 FOXI1Q12951 378 aa10.06□□□□□ -0.8
C9orf47-203ENST00000375851 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
C9orf47-203ENST00000375851 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
C9orf47-203ENST00000375851 CRYGDP07320 174 aa10.06□□□□□ -0.8
C9orf47-203ENST00000375851 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 HIGD2BQ4VC39 106 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 POLR2KP53803 58 aaKnown RBP10.05□□□□□ -0.8
C9orf47-203ENST00000375851 CHCHD10Q8WYQ3 142 aaPredicted RBP10.05□□□□□ -0.8
C9orf47-203ENST00000375851 TRACP01848 142 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 MIFP14174 115 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 DIRC1Q969H9 104 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 CNFNQ9BYD5 112 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 EXPH5Q8NEV8 1989 aa10.05□□□□□ -0.8
C9orf47-203ENST00000375851 CITED1Q99966 193 aa10.04□□□□□ -0.8
C9orf47-203ENST00000375851 H7C423 109 aa10.04□□□□□ -0.8
C9orf47-203ENST00000375851 C9orf85Q96MD7 179 aa10.04□□□□□ -0.8
C9orf47-203ENST00000375851 FAM110AQ9BQ89 295 aa10.04□□□□□ -0.8
C9orf47-203ENST00000375851 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
C9orf47-203ENST00000375851 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 SHISA2Q6UWI4 295 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 TCL1BO95988 128 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 TSHBP01222 138 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 EDN2P20800 178 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 JMJD7-PLA2G4BH0Y9G9 81 aa10.03□□□□□ -0.8
C9orf47-203ENST00000375851 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
C9orf47-203ENST00000375851 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.8
C9orf47-203ENST00000375851 CRIP2P52943 208 aaPredicted RBP10.02□□□□□ -0.81
C9orf47-203ENST00000375851 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
C9orf47-203ENST00000375851 PLA2G2AP14555 144 aa10.02□□□□□ -0.81
C9orf47-203ENST00000375851 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
C9orf47-203ENST00000375851 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
C9orf47-203ENST00000375851 RAI1Q7Z5J4 1906 aaPredicted RBP10.01□□□□□ -0.81
C9orf47-203ENST00000375851 LINC00310P59036 64 aa10□□□□□ -0.81
C9orf47-203ENST00000375851 RBX1P62877 108 aa10□□□□□ -0.81
C9orf47-203ENST00000375851 ODF3L2Q3SX64 289 aa10□□□□□ -0.81
C9orf47-203ENST00000375851 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
C9orf47-203ENST00000375851 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
C9orf47-203ENST00000375851 A8MZ25 164 aa9.99□□□□□ -0.81
C9orf47-203ENST00000375851 H3BQ85 93 aa9.99□□□□□ -0.81
C9orf47-203ENST00000375851 SMR3AQ99954 134 aa9.99□□□□□ -0.81
C9orf47-203ENST00000375851 IBA57-AS1B1ANH7 110 aa9.99□□□□□ -0.81
C9orf47-203ENST00000375851 RBM3P98179 157 aaKnown RBP9.99□□□□□ -0.81
C9orf47-203ENST00000375851 PIK3CD-AS1Q5SR53 167 aa9.99□□□□□ -0.81
C9orf47-203ENST00000375851 NREPQ16612 68 aa9.98□□□□□ -0.81
C9orf47-203ENST00000375851 LOC100131303A0A0U1RQF7 123 aa9.98□□□□□ -0.81
C9orf47-203ENST00000375851 TMEM256-PLSCR3K7ERE1 68 aa9.98□□□□□ -0.81
C9orf47-203ENST00000375851 UBE2AP49459 152 aa9.98□□□□□ -0.81
C9orf47-203ENST00000375851 IGKV2-24A0A0C4DH68 120 aa9.97□□□□□ -0.81
C9orf47-203ENST00000375851 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
C9orf47-203ENST00000375851 COX7BP24311 80 aa9.97□□□□□ -0.81
C9orf47-203ENST00000375851 G3V4G9 280 aa9.96□□□□□ -0.81
C9orf47-203ENST00000375851 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.96□□□□□ -0.81
C9orf47-203ENST00000375851 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.81
C9orf47-203ENST00000375851 C2orf91Q6ZV80 131 aa9.96□□□□□ -0.81
C9orf47-203ENST00000375851 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
C9orf47-203ENST00000375851 MRGPRG-AS1Q2M3A8 158 aa9.95□□□□□ -0.82
C9orf47-203ENST00000375851 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
C9orf47-203ENST00000375851 B5MCH6 92 aa9.95□□□□□ -0.82
C9orf47-203ENST00000375851 BRI3O95415 125 aa9.95□□□□□ -0.82
C9orf47-203ENST00000375851 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
C9orf47-203ENST00000375851 C14orf132Q9NPU4 83 aa9.94□□□□□ -0.82
C9orf47-203ENST00000375851 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
C9orf47-203ENST00000375851 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
C9orf47-203ENST00000375851 ANKRD17O75179 2603 aaKnown RBP9.93□□□□□ -0.82
C9orf47-203ENST00000375851 TRIAP1O43715 76 aa9.93□□□□□ -0.82
C9orf47-203ENST00000375851 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
C9orf47-203ENST00000375851 NDUFA7O95182 113 aa9.93□□□□□ -0.82
C9orf47-203ENST00000375851 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
C9orf47-203ENST00000375851 NDUFS5O43920 106 aa9.93□□□□□ -0.82
C9orf47-203ENST00000375851 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
C9orf47-203ENST00000375851 A0A1B0GX51 115 aa9.92□□□□□ -0.82
C9orf47-203ENST00000375851 IGIPA6NJ69 53 aa9.92□□□□□ -0.82
C9orf47-203ENST00000375851 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
C9orf47-203ENST00000375851 ZNF580Q9UK33 172 aa9.92□□□□□ -0.82
C9orf47-203ENST00000375851 KPRPQ5T749 579 aaPredicted RBP9.92□□□□□ -0.82
C9orf47-203ENST00000375851 UBE2D3P61077 147 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 UBE2D2P62837 147 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 TEX49A0A1B0GTD5 131 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 C14orf177Q52M58 125 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 PDE6GP18545 87 aa9.91□□□□□ -0.82
C9orf47-203ENST00000375851 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 ATOX1O00244 68 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms