RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 VWFP04275 2813 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 RHODO00212 210 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 NSD1Q96L73 2696 aaPredicted RBP9.6□□□□□ -0.87
NCDN-203ENST00000373253 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 IGLV4-3A0A075B6K6 122 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 TRBV20-1A0A075B6N2 111 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 E9PLD3 99 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 F8W1H4 67 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 PRIMA1Q86XR5 153 aa9.6□□□□□ -0.87
NCDN-203ENST00000373253 TRBV7-9A0A0J9YWB2 115 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 MORN3Q6PF18 240 aaPredicted RBP9.59□□□□□ -0.87
NCDN-203ENST00000373253 C5orf38Q86SI9 138 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 A4D1N5 150 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 PFN2P35080 140 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 SLC25A29Q8N8R3 303 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 C1orf158Q8N1D5 194 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 C3orf56Q8N813 242 aa9.59□□□□□ -0.87
NCDN-203ENST00000373253 OR13C6PQ8NH95 151 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 SCGB1A1P11684 91 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 F5H768 121 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 SIVA1O15304 175 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
NCDN-203ENST00000373253 TRBV7-3A0A075B6L6 115 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 KRTAP1-3Q8IUG1 177 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 RHOHQ15669 191 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 SMIM20Q8N5G0 67 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 TENM1Q9UKZ4 2725 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 TIMM17AQ99595 171 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 C1QTNF4Q9BXJ3 329 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 ERG28Q9UKR5 140 aa9.57□□□□□ -0.88
NCDN-203ENST00000373253 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
NCDN-203ENST00000373253 Q9H8V8 135 aa9.56□□□□□ -0.88
NCDN-203ENST00000373253 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
NCDN-203ENST00000373253 XCL1P47992 114 aa9.56□□□□□ -0.88
NCDN-203ENST00000373253 LINC00158P58513 81 aa9.55□□□□□ -0.88
NCDN-203ENST00000373253 FSHBP01225 129 aa9.55□□□□□ -0.88
NCDN-203ENST00000373253 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
NCDN-203ENST00000373253 IGLV4-69A0A075B6H9 119 aa9.55□□□□□ -0.88
NCDN-203ENST00000373253 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
NCDN-203ENST00000373253 GYPEP15421 78 aa9.55□□□□□ -0.88
NCDN-203ENST00000373253 K7EQD1 137 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 BRI3O95415 125 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 TMEM243Q9BU79 118 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 C9JAW5 83 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 NXPH4O95158 308 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 KLK9Q2XQG4 91 aa9.54□□□□□ -0.88
NCDN-203ENST00000373253 TTC32Q5I0X7 151 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 XGP55808 180 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 HILS1P60008 231 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 FOXI1Q12951 378 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 TMEM263Q8WUH6 116 aaKnown RBP9.53□□□□□ -0.88
NCDN-203ENST00000373253 ZNF469Q96JG9 3925 aaPredicted RBP9.53□□□□□ -0.88
NCDN-203ENST00000373253 POM121L12Q8N7R1 296 aa9.53□□□□□ -0.88
NCDN-203ENST00000373253 HERV-K104P63124 156 aa9.52□□□□□ -0.88
NCDN-203ENST00000373253 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
NCDN-203ENST00000373253 HIGD1BQ9P298 99 aa9.52□□□□□ -0.89
NCDN-203ENST00000373253 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
NCDN-203ENST00000373253 PRO1854Q9UHT4 67 aa9.51□□□□□ -0.89
NCDN-203ENST00000373253 SPATA25Q9BR10 227 aa9.51□□□□□ -0.89
NCDN-203ENST00000373253 DAD1P61803 113 aa9.51□□□□□ -0.89
NCDN-203ENST00000373253 LYRM7Q5U5X0 104 aa9.51□□□□□ -0.89
NCDN-203ENST00000373253 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 MRAPQ8TCY5 172 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 SNCGO76070 127 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 COX6CP09669 75 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
NCDN-203ENST00000373253 LEPROTO15243 131 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 PAX4O43316 350 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 SPATA3Q8NHX4 192 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 FBN1P35555 2871 aaKnown RBP9.49□□□□□ -0.89
NCDN-203ENST00000373253 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 DEFB121Q5J5C9 76 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 NFE4Q86UQ8 179 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.49□□□□□ -0.89
NCDN-203ENST00000373253 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 ANGP03950 147 aaKnown RBP9.49□□□□□ -0.89
NCDN-203ENST00000373253 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
NCDN-203ENST00000373253 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
NCDN-203ENST00000373253 COX6A2Q02221 97 aa9.48□□□□□ -0.89
NCDN-203ENST00000373253 C16orf74Q96GX8 76 aa9.48□□□□□ -0.89
NCDN-203ENST00000373253 A0A0J9YXY3 114 aa9.48□□□□□ -0.89
NCDN-203ENST00000373253 SHISA2Q6UWI4 295 aa9.48□□□□□ -0.89
NCDN-203ENST00000373253 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
NCDN-203ENST00000373253 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 TSPAN13O95857 204 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms