RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 G3V4G9 280 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 TSHBP01222 138 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 HIGD2AQ9BW72 106 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 DCANP1Q8TF63 244 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 CACNA1AO00555 2505 aa14.5□□□□□ -0.09
LMO4-202ENST00000370544 AVPP01185 164 aa14.49□□□□□ -0.09
LMO4-202ENST00000370544 PIK3CD-AS1Q5SR53 167 aa14.49□□□□□ -0.09
LMO4-202ENST00000370544 SS18L2Q9UHA2 77 aa14.49□□□□□ -0.09
LMO4-202ENST00000370544 C9orf85Q96MD7 179 aa14.48□□□□□ -0.09
LMO4-202ENST00000370544 CHKB-CPT1BH3BT56 60 aa14.48□□□□□ -0.09
LMO4-202ENST00000370544 PTPN13Q12923 2485 aa14.47□□□□□ -0.09
LMO4-202ENST00000370544 WFDC9Q8NEX5 89 aa14.47□□□□□ -0.09
LMO4-202ENST00000370544 TRAV10A0A0B4J240 114 aa14.47□□□□□ -0.09
LMO4-202ENST00000370544 H0Y9J4 135 aa14.47□□□□□ -0.09
LMO4-202ENST00000370544 PLA2G2AP14555 144 aa14.47□□□□□ -0.09
LMO4-202ENST00000370544 RBX1P62877 108 aa14.46□□□□□ -0.09
LMO4-202ENST00000370544 FAM19A1Q7Z5A9 133 aa14.46□□□□□ -0.1
LMO4-202ENST00000370544 SMIM20Q8N5G0 67 aa14.46□□□□□ -0.1
LMO4-202ENST00000370544 XAGE1AQ9HD64 81 aa14.45□□□□□ -0.1
LMO4-202ENST00000370544 LOC100131303A0A0U1RQF7 123 aa14.45□□□□□ -0.1
LMO4-202ENST00000370544 PRM2P04554 102 aa14.44□□□□□ -0.1
LMO4-202ENST00000370544 ATRXP46100 2492 aa14.44□□□□□ -0.1
LMO4-202ENST00000370544 LINC00643Q86TS7 51 aa14.44□□□□□ -0.1
LMO4-202ENST00000370544 KIR2DL5BQ8NHK3 375 aa14.43□□□□□ -0.1
LMO4-202ENST00000370544 UBE2D4Q9Y2X8 147 aa14.43□□□□□ -0.1
LMO4-202ENST00000370544 PRB2P02812 416 aaPredicted RBP14.43□□□□□ -0.1
LMO4-202ENST00000370544 A8MZ25 164 aa14.43□□□□□ -0.1
LMO4-202ENST00000370544 SYCNQ0VAF6 134 aa14.43□□□□□ -0.1
LMO4-202ENST00000370544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.43□□□□□ -0.1
LMO4-202ENST00000370544 FAM19A5Q7Z5A7 132 aaPredicted RBP14.42□□□□□ -0.1
LMO4-202ENST00000370544 A0A087WZ39 114 aa14.42□□□□□ -0.1
LMO4-202ENST00000370544 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
LMO4-202ENST00000370544 TRIAP1O43715 76 aa14.42□□□□□ -0.1
LMO4-202ENST00000370544 SLPIP03973 132 aa14.42□□□□□ -0.1
LMO4-202ENST00000370544 POLR2KP53803 58 aaKnown RBP14.41□□□□□ -0.1
LMO4-202ENST00000370544 CD164L2Q6UWJ8 174 aa14.41□□□□□ -0.1
LMO4-202ENST00000370544 KPRPQ5T749 579 aaPredicted RBP14.41□□□□□ -0.1
LMO4-202ENST00000370544 BPY2O14599 106 aa14.4□□□□□ -0.1
LMO4-202ENST00000370544 WNK1Q9H4A3 2382 aa14.4□□□□□ -0.1
LMO4-202ENST00000370544 KRTAP10-9P60411 292 aa14.4□□□□□ -0.1
LMO4-202ENST00000370544 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.4□□□□□ -0.1
LMO4-202ENST00000370544 GAS8-AS1O95177 125 aa14.4□□□□□ -0.1
LMO4-202ENST00000370544 C5orf47Q569G3 176 aa14.4□□□□□ -0.1
LMO4-202ENST00000370544 TRBV30A0A0K0K1B3 111 aa14.4□□□□□ -0.11
LMO4-202ENST00000370544 LELP1Q5T871 98 aa14.4□□□□□ -0.11
LMO4-202ENST00000370544 ATG2AQ2TAZ0 1938 aa14.39□□□□□ -0.11
LMO4-202ENST00000370544 EDN2P20800 178 aa14.39□□□□□ -0.11
LMO4-202ENST00000370544 UPK3BQ9BT76 320 aa14.39□□□□□ -0.11
LMO4-202ENST00000370544 MRPS12O15235 138 aaKnown RBP14.39□□□□□ -0.11
LMO4-202ENST00000370544 DSCAML1Q8TD84 2053 aa14.39□□□□□ -0.11
LMO4-202ENST00000370544 TIMM17BO60830 172 aa14.38□□□□□ -0.11
LMO4-202ENST00000370544 MRPS36P82909 103 aaKnown RBP14.38□□□□□ -0.11
LMO4-202ENST00000370544 LINC00959A0A1B0GUT2 108 aa14.38□□□□□ -0.11
LMO4-202ENST00000370544 NDUFA7O95182 113 aa14.38□□□□□ -0.11
LMO4-202ENST00000370544 CLUHP3Q96NS8 147 aa14.38□□□□□ -0.11
LMO4-202ENST00000370544 CNFNQ9BYD5 112 aa14.37□□□□□ -0.11
LMO4-202ENST00000370544 A0A096LNI7 61 aa14.37□□□□□ -0.11
LMO4-202ENST00000370544 NAV2Q8IVL1 2488 aa14.36□□□□□ -0.11
LMO4-202ENST00000370544 C6orf99Q4VX62 202 aa14.36□□□□□ -0.11
LMO4-202ENST00000370544 TANC2Q9HCD6 1990 aa14.36□□□□□ -0.11
LMO4-202ENST00000370544 CRIP2P52943 208 aaPredicted RBP14.36□□□□□ -0.11
LMO4-202ENST00000370544 SMR3AQ99954 134 aa14.36□□□□□ -0.11
LMO4-202ENST00000370544 TRAV23DV6A0A075B6W5 121 aa14.35□□□□□ -0.11
LMO4-202ENST00000370544 UBE2D1P51668 147 aa14.35□□□□□ -0.11
LMO4-202ENST00000370544 HCFC1P51610 2035 aa14.35□□□□□ -0.11
LMO4-202ENST00000370544 UBE2D3P61077 147 aa14.34□□□□□ -0.11
LMO4-202ENST00000370544 UBE2D2P62837 147 aa14.34□□□□□ -0.11
LMO4-202ENST00000370544 LINC00526Q96FQ7 95 aa14.34□□□□□ -0.11
LMO4-202ENST00000370544 PLXNB1O43157 2135 aa14.34□□□□□ -0.11
LMO4-202ENST00000370544 A0A1W2PPR1 153 aa14.34□□□□□ -0.11
LMO4-202ENST00000370544 ODF3L2Q3SX64 289 aa14.34□□□□□ -0.11
LMO4-202ENST00000370544 COL5A1P20908 1838 aaPredicted RBP14.33□□□□□ -0.11
LMO4-202ENST00000370544 SONP18583 2426 aaKnown RBP14.33□□□□□ -0.12
LMO4-202ENST00000370544 LRCOL1A6NCL2 159 aa14.32□□□□□ -0.12
LMO4-202ENST00000370544 MRGPRG-AS1Q2M3A8 158 aa14.32□□□□□ -0.12
LMO4-202ENST00000370544 C2orf91Q6ZV80 131 aa14.32□□□□□ -0.12
LMO4-202ENST00000370544 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
LMO4-202ENST00000370544 NCOR2Q9Y618 2525 aa14.32□□□□□ -0.12
LMO4-202ENST00000370544 SDIM1Q6ZPB5 146 aa14.32□□□□□ -0.12
LMO4-202ENST00000370544 IGHV4-30-4P0DP06 118 aa14.31□□□□□ -0.12
LMO4-202ENST00000370544 NAV3Q8IVL0 2385 aa14.31□□□□□ -0.12
LMO4-202ENST00000370544 HIVEP3Q5T1R4 2406 aa14.31□□□□□ -0.12
LMO4-202ENST00000370544 EP400Q96L91 3159 aa14.31□□□□□ -0.12
LMO4-202ENST00000370544 OXLD1Q5BKU9 147 aa14.31□□□□□ -0.12
LMO4-202ENST00000370544 IGKV2-28A0A075B6P5 120 aa14.3□□□□□ -0.12
LMO4-202ENST00000370544 IGKV2D-28P01615 120 aa14.3□□□□□ -0.12
LMO4-202ENST00000370544 IGLV4-69A0A075B6H9 119 aa14.3□□□□□ -0.12
LMO4-202ENST00000370544 IGF2RP11717 2491 aa14.29□□□□□ -0.12
LMO4-202ENST00000370544 CDC42SE2Q9NRR3 84 aa14.29□□□□□ -0.12
LMO4-202ENST00000370544 A0A0J9YWU9 116 aa14.29□□□□□ -0.12
LMO4-202ENST00000370544 J3KT08 172 aa14.29□□□□□ -0.12
LMO4-202ENST00000370544 MT-ATP8P03928 68 aa14.29□□□□□ -0.12
LMO4-202ENST00000370544 NANOS2P60321 138 aaKnown RBP14.29□□□□□ -0.12
LMO4-202ENST00000370544 M0R378 163 aa14.28□□□□□ -0.12
LMO4-202ENST00000370544 SCXQ7RTU7 201 aa14.28□□□□□ -0.12
LMO4-202ENST00000370544 IGKV4-1P06312 121 aa14.28□□□□□ -0.12
LMO4-202ENST00000370544 ATP5EP2Q5VTU8 51 aa14.27□□□□□ -0.12
LMO4-202ENST00000370544 IGIPA6NJ69 53 aa14.26□□□□□ -0.13
LMO4-202ENST00000370544 IGLV1-51P01701 117 aa14.26□□□□□ -0.13
LMO4-202ENST00000370544 M0R2N4 97 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms