RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 Q6ZS46 218 aa10.21□□□□□ -0.78
VCP-201ENST00000358901 FASNP49327 2511 aaKnown RBP10.2□□□□□ -0.78
VCP-201ENST00000358901 FUSP35637 526 aaKnown RBP eCLIP10.2□□□□□ -0.783e-7■■□□□ 13.8
VCP-201ENST00000358901 LINC00643Q86TS7 51 aa10.2□□□□□ -0.78
VCP-201ENST00000358901 CNFNQ9BYD5 112 aa10.2□□□□□ -0.78
VCP-201ENST00000358901 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
VCP-201ENST00000358901 CXCL5P42830 114 aa10.2□□□□□ -0.78
VCP-201ENST00000358901 POLR2KP53803 58 aaKnown RBP10.2□□□□□ -0.78
VCP-201ENST00000358901 Q6YL49 198 aa10.2□□□□□ -0.78
VCP-201ENST00000358901 RANBP2P49792 3224 aaKnown RBP10.2□□□□□ -0.78
VCP-201ENST00000358901 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
VCP-201ENST00000358901 PIK3CD-AS1Q5SR53 167 aa10.19□□□□□ -0.78
VCP-201ENST00000358901 CFAP126Q5VTH2 177 aa10.19□□□□□ -0.78
VCP-201ENST00000358901 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
VCP-201ENST00000358901 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
VCP-201ENST00000358901 PRM2P04554 102 aa10.19□□□□□ -0.78
VCP-201ENST00000358901 PSMB8P28062 276 aa10.18□□□□□ -0.78
VCP-201ENST00000358901 KLLNB2CW77 178 aa10.18□□□□□ -0.78
VCP-201ENST00000358901 WFDC11Q8NEX6 87 aa10.18□□□□□ -0.78
VCP-201ENST00000358901 A0A0C4DFX4 3053 aa10.17□□□□□ -0.78
VCP-201ENST00000358901 NREPQ16612 68 aa10.17□□□□□ -0.78
VCP-201ENST00000358901 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
VCP-201ENST00000358901 CRYGDP07320 174 aa10.17□□□□□ -0.78
VCP-201ENST00000358901 IGHV4-31P0DP07 118 aa10.17□□□□□ -0.78
VCP-201ENST00000358901 TSHBP01222 138 aa10.17□□□□□ -0.78
VCP-201ENST00000358901 TMEM256-PLSCR3K7ERE1 68 aa10.16□□□□□ -0.78
VCP-201ENST00000358901 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
VCP-201ENST00000358901 NDUFV3P56181 108 aaKnown RBP10.16□□□□□ -0.78
VCP-201ENST00000358901 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
VCP-201ENST00000358901 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
VCP-201ENST00000358901 TRBV30A0A0K0K1B3 111 aa10.15□□□□□ -0.78
VCP-201ENST00000358901 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.78
VCP-201ENST00000358901 CCL18P55774 89 aa10.15□□□□□ -0.78
VCP-201ENST00000358901 PRORYQ9H606 182 aa10.15□□□□□ -0.78
VCP-201ENST00000358901 ACANP16112 2415 aa10.15□□□□□ -0.79
VCP-201ENST00000358901 INSL3P51460 131 aa10.14□□□□□ -0.79
VCP-201ENST00000358901 TIRAPP58753 221 aa10.14□□□□□ -0.79
VCP-201ENST00000358901 Q6ZSV7 163 aa10.14□□□□□ -0.79
VCP-201ENST00000358901 DCANP1Q8TF63 244 aa10.14□□□□□ -0.79
VCP-201ENST00000358901 HTTP42858 3142 aa10.13□□□□□ -0.79
VCP-201ENST00000358901 LAMA2P24043 3122 aaKnown RBP10.13□□□□□ -0.79
VCP-201ENST00000358901 SLPIP03973 132 aa10.13□□□□□ -0.79
VCP-201ENST00000358901 REG3AQ06141 175 aa10.12□□□□□ -0.79
VCP-201ENST00000358901 CPAMD8Q8IZJ3 1885 aa10.12□□□□□ -0.79
VCP-201ENST00000358901 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
VCP-201ENST00000358901 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
VCP-201ENST00000358901 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
VCP-201ENST00000358901 LAMA3Q16787 3333 aa10.12□□□□□ -0.79
VCP-201ENST00000358901 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
VCP-201ENST00000358901 A0A096LNJ9 63 aa10.11□□□□□ -0.79
VCP-201ENST00000358901 TRBV6-8A0A0A6YYG3 113 aa10.11□□□□□ -0.79
VCP-201ENST00000358901 IGLV1-40P01703 118 aa10.11□□□□□ -0.79
VCP-201ENST00000358901 TMEM258P61165 79 aa10.11□□□□□ -0.79
VCP-201ENST00000358901 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
VCP-201ENST00000358901 TRAV23DV6A0A075B6W5 121 aa10.11□□□□□ -0.79
VCP-201ENST00000358901 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
VCP-201ENST00000358901 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
VCP-201ENST00000358901 C18orf65Q6ZTR6 163 aa10.1□□□□□ -0.79
VCP-201ENST00000358901 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
VCP-201ENST00000358901 AGRNO00468 2067 aa10.1□□□□□ -0.79
VCP-201ENST00000358901 AVPP01185 164 aa10.1□□□□□ -0.79
VCP-201ENST00000358901 EDN2P20800 178 aa10.1□□□□□ -0.79
VCP-201ENST00000358901 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
VCP-201ENST00000358901 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
VCP-201ENST00000358901 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
VCP-201ENST00000358901 J3KT08 172 aa10.09□□□□□ -0.79
VCP-201ENST00000358901 TRBV6-4A0A1B0GX49 114 aa10.08□□□□□ -0.8
VCP-201ENST00000358901 COX7BP24311 80 aa10.08□□□□□ -0.8
VCP-201ENST00000358901 UFSP1Q6NVU6 142 aa10.08□□□□□ -0.8
VCP-201ENST00000358901 H3BQ85 93 aa10.08□□□□□ -0.8
VCP-201ENST00000358901 UBE2D4Q9Y2X8 147 aa10.08□□□□□ -0.8
VCP-201ENST00000358901 WFDC10AQ9H1F0 79 aa10.08□□□□□ -0.8
VCP-201ENST00000358901 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
VCP-201ENST00000358901 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
VCP-201ENST00000358901 XGP55808 180 aa10.07□□□□□ -0.8
VCP-201ENST00000358901 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
VCP-201ENST00000358901 A0A1W2PPR1 153 aa10.07□□□□□ -0.8
VCP-201ENST00000358901 LRRC75A-AS1Q8N1F1 130 aa10.07□□□□□ -0.8
VCP-201ENST00000358901 NDUFS5O43920 106 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 PDE6GP18545 87 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 LST1O00453 97 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 H7C423 109 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 TIMM17BO60830 172 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 C6orf99Q4VX62 202 aa10.06□□□□□ -0.8
VCP-201ENST00000358901 C20orf197Q8N268 126 aa10.05□□□□□ -0.8
VCP-201ENST00000358901 TET2Q6N021 2002 aaPredicted RBP10.05□□□□□ -0.8
VCP-201ENST00000358901 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
VCP-201ENST00000358901 MRPS36P82909 103 aaKnown RBP10.05□□□□□ -0.8
VCP-201ENST00000358901 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
VCP-201ENST00000358901 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
VCP-201ENST00000358901 BBC3Q96PG8 261 aaPredicted RBP10.04□□□□□ -0.8
VCP-201ENST00000358901 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
VCP-201ENST00000358901 UQCRQO14949 82 aa10.04□□□□□ -0.8
VCP-201ENST00000358901 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
VCP-201ENST00000358901 UBE2D1P51668 147 aa10.03□□□□□ -0.8
VCP-201ENST00000358901 MRGPRG-AS1Q2M3A8 158 aa10.03□□□□□ -0.8
VCP-201ENST00000358901 EXPH5Q8NEV8 1989 aa10.03□□□□□ -0.8
VCP-201ENST00000358901 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms