RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 CIDEAO60543 219 aa15.56■□□□□ 0.08
LIMS2-202ENST00000355119 SFTA2Q6UW10 78 aa15.56■□□□□ 0.08
LIMS2-202ENST00000355119 LITAFQ99732 161 aa15.56■□□□□ 0.08
LIMS2-202ENST00000355119 SPANXDQ9BXN6 97 aa15.56■□□□□ 0.08
LIMS2-202ENST00000355119 SPANXCQ9NY87 97 aa15.56■□□□□ 0.08
LIMS2-202ENST00000355119 CSDC2Q9Y534 153 aaKnown RBP15.56■□□□□ 0.08
LIMS2-202ENST00000355119 PLAC8L1A1L4L8 177 aa15.55■□□□□ 0.08
LIMS2-202ENST00000355119 ETDBQ3ZM63 59 aa15.55■□□□□ 0.08
LIMS2-202ENST00000355119 ZFAND6Q6FIF0 208 aa15.55■□□□□ 0.08
LIMS2-202ENST00000355119 ZNF469Q96JG9 3925 aaPredicted RBP15.55■□□□□ 0.08
LIMS2-202ENST00000355119 MTURNQ8N3F0 131 aa15.55■□□□□ 0.08
LIMS2-202ENST00000355119 OVOL2Q9BRP0 275 aa15.55■□□□□ 0.08
LIMS2-202ENST00000355119 CDKN2A-AS1Q9UH64 79 aa15.55■□□□□ 0.08
LIMS2-202ENST00000355119 TLN2Q9Y4G6 2542 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE12JA6NER3 117 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 IGHV3-33P01772 117 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 HERVK_113P63121 156 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE4Q13068 117 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE5Q13069 117 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 SH2D6Q7Z4S9 175 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 FAM19A3Q7Z5A8 133 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 SBSPONQ8IVN8 264 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 ERG28Q9UKR5 140 aa15.54■□□□□ 0.08
LIMS2-202ENST00000355119 SONP18583 2426 aaKnown RBP15.54■□□□□ 0.08
LIMS2-202ENST00000355119 C21orf62-AS1Q17RA5 79 aa15.53■□□□□ 0.08
LIMS2-202ENST00000355119 NTM-AS1Q6ZSK4 140 aa15.53■□□□□ 0.08
LIMS2-202ENST00000355119 CSNK1G2-AS1Q8NCQ2 148 aa15.53■□□□□ 0.08
LIMS2-202ENST00000355119 AKAP9Q99996 3911 aa15.53■□□□□ 0.08
LIMS2-202ENST00000355119 FLNAP21333 2647 aaKnown RBP15.53■□□□□ 0.08
LIMS2-202ENST00000355119 EIF4EBP3O60516 100 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-202ENST00000355119 TIMM17BO60830 172 aa15.53■□□□□ 0.08
LIMS2-202ENST00000355119 PDZD2O15018 2839 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 TRGV2A0A075B6R0 118 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE7O76087 117 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE12FP0CL80 117 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE12GP0CL81 117 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 GAGE12IP0CL82 117 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 SCGB1C2P0DMR2 95 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 LINC00694P0DN24 101 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 GTSF1LQ9H1H1 148 aa15.52■□□□□ 0.08
LIMS2-202ENST00000355119 TCL1BO95988 128 aa15.51■□□□□ 0.07
LIMS2-202ENST00000355119 MIAQ16674 131 aa15.51■□□□□ 0.07
LIMS2-202ENST00000355119 TMEM101Q96IK0 257 aa15.51■□□□□ 0.07
LIMS2-202ENST00000355119 TENM4Q6N022 2769 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 A8MZ25 164 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 NDUFA1O15239 70 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 LINC00242Q5T6M2 205 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 ATP6V0E2Q8NHE4 81 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 TRBV6-4A0A1B0GX49 114 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 PRSS2P07478 247 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 COX6A2Q02221 97 aa15.5■□□□□ 0.07
LIMS2-202ENST00000355119 SMCPP49901 116 aaPredicted RBP15.49■□□□□ 0.07
LIMS2-202ENST00000355119 ADAMTSL4-AS1Q5T5F5 129 aa15.49■□□□□ 0.07
LIMS2-202ENST00000355119 TMEM243Q9BU79 118 aa15.49■□□□□ 0.07
LIMS2-202ENST00000355119 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.48■□□□□ 0.07
LIMS2-202ENST00000355119 IGLV5-39A0A0G2JS06 123 aa15.48■□□□□ 0.07
LIMS2-202ENST00000355119 UBE2L6O14933 153 aa15.47■□□□□ 0.07
LIMS2-202ENST00000355119 RNF183Q96D59 192 aa15.47■□□□□ 0.07
LIMS2-202ENST00000355119 CDC42SE2Q9NRR3 84 aa15.47■□□□□ 0.07
LIMS2-202ENST00000355119 WNK1Q9H4A3 2382 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 TRGV4A0A0C4DH28 118 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 H7C423 109 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 PF4P02776 101 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 IFITM1P13164 125 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 KRTAP10-3P60369 221 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 Q1RN00 199 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 SMR3AQ99954 134 aa15.46■□□□□ 0.07
LIMS2-202ENST00000355119 H7C2G1 150 aa15.45■□□□□ 0.06
LIMS2-202ENST00000355119 CCDC168Q8NDH2 2452 aa15.44■□□□□ 0.06
LIMS2-202ENST00000355119 TRAV13-1A0A0B4J241 112 aa15.44■□□□□ 0.06
LIMS2-202ENST00000355119 CIRBPQ14011 172 aaKnown RBP15.44■□□□□ 0.06
LIMS2-202ENST00000355119 LINC00482Q8N8I6 264 aa15.44■□□□□ 0.06
LIMS2-202ENST00000355119 HELZ2Q9BYK8 2649 aaKnown RBP15.43■□□□□ 0.06
LIMS2-202ENST00000355119 NBPF19A0A087WUL8 3843 aa15.43■□□□□ 0.06
LIMS2-202ENST00000355119 LOC100131303A0A0U1RQF7 123 aa15.42■□□□□ 0.06
LIMS2-202ENST00000355119 SMIM1B2RUZ4 78 aa15.42■□□□□ 0.06
LIMS2-202ENST00000355119 ANK3Q12955 4377 aaKnown RBP15.42■□□□□ 0.06
LIMS2-202ENST00000355119 TRBV30A0A0K0K1B3 111 aa15.41■□□□□ 0.06
LIMS2-202ENST00000355119 LY6G6DO95868 133 aa15.41■□□□□ 0.06
LIMS2-202ENST00000355119 FOXI1Q12951 378 aa15.41■□□□□ 0.06
LIMS2-202ENST00000355119 FHL2Q14192 279 aa15.41■□□□□ 0.06
LIMS2-202ENST00000355119 Q9H8V8 135 aa15.4■□□□□ 0.06
LIMS2-202ENST00000355119 TEN1Q86WV5 123 aa15.39■□□□□ 0.05
LIMS2-202ENST00000355119 GAGE12HA6NDE8 117 aa15.39■□□□□ 0.05
LIMS2-202ENST00000355119 M0QXV9 152 aa15.39■□□□□ 0.05
LIMS2-202ENST00000355119 INSL3P51460 131 aa15.39■□□□□ 0.05
LIMS2-202ENST00000355119 F5H768 121 aa15.38■□□□□ 0.05
LIMS2-202ENST00000355119 NPC2P61916 151 aa15.38■□□□□ 0.05
LIMS2-202ENST00000355119 ATXN8Q156A1 80 aa15.38■□□□□ 0.05
LIMS2-202ENST00000355119 KIR2DL5BQ8NHK3 375 aa15.38■□□□□ 0.05
LIMS2-202ENST00000355119 PPDPFLQ8WWR9 84 aa15.38■□□□□ 0.05
LIMS2-202ENST00000355119 SPATA25Q9BR10 227 aa15.38■□□□□ 0.05
LIMS2-202ENST00000355119 COPS9Q8WXC6 57 aa15.37■□□□□ 0.05
LIMS2-202ENST00000355119 GCN1Q92616 2671 aaKnown RBP15.37■□□□□ 0.05
LIMS2-202ENST00000355119 TRIAP1O43715 76 aa15.36■□□□□ 0.05
LIMS2-202ENST00000355119 ICOSQ9Y6W8 199 aa15.36■□□□□ 0.05
LIMS2-202ENST00000355119 TRBV6-8A0A0A6YYG3 113 aa15.35■□□□□ 0.05
LIMS2-202ENST00000355119 CRLF1O75462 422 aa15.35■□□□□ 0.05
LIMS2-202ENST00000355119 HERV-K104P63124 156 aa15.35■□□□□ 0.05
LIMS2-202ENST00000355119 GAGE6Q13070 117 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms