RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 STHQ8IWL8 128 aa17.45■□□□□ 0.38
PTPA-202ENST00000347048 NDUFA1O15239 70 aa17.44■□□□□ 0.38
PTPA-202ENST00000347048 TRIAP1O43715 76 aa17.44■□□□□ 0.38
PTPA-202ENST00000347048 XCL2Q9UBD3 114 aa17.44■□□□□ 0.38
PTPA-202ENST00000347048 PTPN13Q12923 2485 aa17.43■□□□□ 0.38
PTPA-202ENST00000347048 CDKN2A-AS1Q9UH64 79 aa17.43■□□□□ 0.38
PTPA-202ENST00000347048 ICOSQ9Y6W8 199 aa17.43■□□□□ 0.38
PTPA-202ENST00000347048 TRBV10-1A0A0K0K1A3 114 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 HERVK_113P63121 156 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 Q6ZSV7 163 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 FAM19A3Q7Z5A8 133 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 CIDEAO60543 219 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 COX6CP09669 75 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 C1orf158Q8N1D5 194 aa17.42■□□□□ 0.38
PTPA-202ENST00000347048 TRBV10-2A0A0K0K1G8 114 aa17.41■□□□□ 0.38
PTPA-202ENST00000347048 A8MZ25 164 aa17.4■□□□□ 0.38
PTPA-202ENST00000347048 CSDC2Q9Y534 153 aaKnown RBP17.4■□□□□ 0.38
PTPA-202ENST00000347048 TMEM101Q96IK0 257 aa17.4■□□□□ 0.38
PTPA-202ENST00000347048 XGP55808 180 aa17.39■□□□□ 0.37
PTPA-202ENST00000347048 RPL36AP83881 106 aaKnown RBP17.39■□□□□ 0.37
PTPA-202ENST00000347048 CIRBPQ14011 172 aaKnown RBP17.39■□□□□ 0.37
PTPA-202ENST00000347048 RPL36ALQ969Q0 106 aaKnown RBP17.39■□□□□ 0.37
PTPA-202ENST00000347048 HECTD1Q9ULT8 2610 aa17.39■□□□□ 0.37
PTPA-202ENST00000347048 TRGV1A0A0A0MS02 117 aa17.39■□□□□ 0.37
PTPA-202ENST00000347048 IGLV5-39A0A0G2JS06 123 aa17.39■□□□□ 0.37
PTPA-202ENST00000347048 DAZ2Q13117 558 aaKnown RBP17.39■□□□□ 0.37
PTPA-202ENST00000347048 DAZ4Q86SG3 579 aaKnown RBP17.39■□□□□ 0.37
PTPA-202ENST00000347048 DAZ3Q9NR90 486 aaKnown RBP17.39■□□□□ 0.37
PTPA-202ENST00000347048 IGHV3OR16-12A0A075B7B8 117 aa17.38■□□□□ 0.37
PTPA-202ENST00000347048 MT-ATP8P03928 68 aa17.38■□□□□ 0.37
PTPA-202ENST00000347048 RPL13AP40429 203 aaKnown RBP17.38■□□□□ 0.37
PTPA-202ENST00000347048 K7EQD1 137 aa17.37■□□□□ 0.37
PTPA-202ENST00000347048 KRTAP1-3Q8IUG1 177 aa17.37■□□□□ 0.37
PTPA-202ENST00000347048 POLQO75417 2590 aa17.36■□□□□ 0.37
PTPA-202ENST00000347048 ABCA12Q86UK0 2595 aa17.36■□□□□ 0.37
PTPA-202ENST00000347048 APCP25054 2843 aa17.36■□□□□ 0.37
PTPA-202ENST00000347048 TRAV4A0A0B4J268 109 aa17.36■□□□□ 0.37
PTPA-202ENST00000347048 CREBBPQ92793 2442 aa17.35■□□□□ 0.37
PTPA-202ENST00000347048 CMC4P56277 68 aaPredicted RBP17.35■□□□□ 0.37
PTPA-202ENST00000347048 LINC00242Q5T6M2 205 aa17.35■□□□□ 0.37
PTPA-202ENST00000347048 CKS1BP61024 79 aa17.35■□□□□ 0.37
PTPA-202ENST00000347048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.35■□□□□ 0.37
PTPA-202ENST00000347048 NTN5Q8WTR8 489 aaPredicted RBP17.35■□□□□ 0.37
PTPA-202ENST00000347048 COPS9Q8WXC6 57 aa17.35■□□□□ 0.37
PTPA-202ENST00000347048 CCL24O00175 119 aa17.34■□□□□ 0.37
PTPA-202ENST00000347048 MAP1AP78559 2803 aaPredicted RBP17.34■□□□□ 0.37
PTPA-202ENST00000347048 DNAJC9-AS1A6NH13 148 aa17.33■□□□□ 0.37
PTPA-202ENST00000347048 H3BT86 120 aa17.33■□□□□ 0.37
PTPA-202ENST00000347048 COX6A2Q02221 97 aa17.33■□□□□ 0.37
PTPA-202ENST00000347048 NPC2P61916 151 aa17.33■□□□□ 0.36
PTPA-202ENST00000347048 LINC00694P0DN24 101 aa17.3■□□□□ 0.36
PTPA-202ENST00000347048 Q6ZTI0 123 aa17.3■□□□□ 0.36
PTPA-202ENST00000347048 Q9H8V8 135 aa17.3■□□□□ 0.36
PTPA-202ENST00000347048 LST1O00453 97 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 HIST2H2BDQ6DRA6 164 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 C2orf82Q6UX34 121 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 UBE2WQ96B02 151 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 UNC79Q9P2D8 2635 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 SMIM1B2RUZ4 78 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 NTM-AS1Q6ZSK4 140 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 LINC00308Q8TCZ7 52 aa17.29■□□□□ 0.36
PTPA-202ENST00000347048 H7C423 109 aa17.28■□□□□ 0.36
PTPA-202ENST00000347048 A0A1W2PRX2 142 aa17.28■□□□□ 0.36
PTPA-202ENST00000347048 CDC42SE2Q9NRR3 84 aa17.28■□□□□ 0.36
PTPA-202ENST00000347048 PPDPFQ9H3Y8 114 aa17.27■□□□□ 0.36
PTPA-202ENST00000347048 ZANQ9Y493 2812 aa17.27■□□□□ 0.35
PTPA-202ENST00000347048 DAND5Q8N907 189 aa17.26■□□□□ 0.35
PTPA-202ENST00000347048 HERV-K104P63124 156 aa17.26■□□□□ 0.35
PTPA-202ENST00000347048 C16orf74Q96GX8 76 aa17.26■□□□□ 0.35
PTPA-202ENST00000347048 FAM110AQ9BQ89 295 aa17.25■□□□□ 0.35
PTPA-202ENST00000347048 PDZD2O15018 2839 aa17.25■□□□□ 0.35
PTPA-202ENST00000347048 ITPR2Q14571 2701 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 TRAV13-1A0A0B4J241 112 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 GAGE12JA6NER3 117 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 GAGE4Q13068 117 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 GAGE5Q13069 117 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 CITED2Q99967 270 aaPredicted RBP17.24■□□□□ 0.35
PTPA-202ENST00000347048 MXRA5Q9NR99 2828 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 TRAV8-4A0A0B4J246 113 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 TEX49A0A1B0GTD5 131 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 C11orf44Q8N8P7 122 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 CLEC2BQ92478 149 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 ZNF625Q96I27 306 aaPredicted RBP17.24■□□□□ 0.35
PTPA-202ENST00000347048 TMEM243Q9BU79 118 aa17.24■□□□□ 0.35
PTPA-202ENST00000347048 F5H768 121 aa17.23■□□□□ 0.35
PTPA-202ENST00000347048 CITED1Q99966 193 aa17.23■□□□□ 0.35
PTPA-202ENST00000347048 NOP10Q9NPE3 64 aaKnown RBP17.23■□□□□ 0.35
PTPA-202ENST00000347048 UBE2L6O14933 153 aa17.22■□□□□ 0.35
PTPA-202ENST00000347048 PRIMA1Q86XR5 153 aa17.22■□□□□ 0.35
PTPA-202ENST00000347048 ESM1Q9NQ30 184 aa17.21■□□□□ 0.35
PTPA-202ENST00000347048 NDUFA7O95182 113 aa17.2■□□□□ 0.34
PTPA-202ENST00000347048 GIG44P09565 113 aaPredicted RBP17.2■□□□□ 0.34
PTPA-202ENST00000347048 NAV2Q8IVL1 2488 aa17.2■□□□□ 0.34
PTPA-202ENST00000347048 TRBV6-4A0A1B0GX49 114 aa17.2■□□□□ 0.34
PTPA-202ENST00000347048 DEFB121Q5J5C9 76 aa17.19■□□□□ 0.34
PTPA-202ENST00000347048 MEIG1Q5JSS6 88 aa17.19■□□□□ 0.34
PTPA-202ENST00000347048 C16orf95Q9H693 158 aa17.19■□□□□ 0.34
PTPA-202ENST00000347048 PLAC8L1A1L4L8 177 aa17.19■□□□□ 0.34
PTPA-202ENST00000347048 SNCGO76070 127 aa17.19■□□□□ 0.34
PTPA-202ENST00000347048 OVOL2Q9BRP0 275 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms