RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ODF3BA8MYP8 253 aa8.99□□□□□ -0.97
COL12A1-202ENST00000345356 Q6ZTI0 123 aa8.99□□□□□ -0.97
COL12A1-202ENST00000345356 KLK12Q9UKR0 248 aa8.98□□□□□ -0.97
COL12A1-202ENST00000345356 CCKP06307 115 aa8.98□□□□□ -0.97
COL12A1-202ENST00000345356 A6NED7 52 aa8.98□□□□□ -0.97
COL12A1-202ENST00000345356 H0Y9J4 135 aa8.98□□□□□ -0.97
COL12A1-202ENST00000345356 UBE2D4Q9Y2X8 147 aa8.97□□□□□ -0.97
COL12A1-202ENST00000345356 NUP210LQ5VU65 1888 aa8.97□□□□□ -0.97
COL12A1-202ENST00000345356 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.97
COL12A1-202ENST00000345356 C3orf84H3BNL1 204 aa8.96□□□□□ -0.97
COL12A1-202ENST00000345356 MAP6D1Q9H9H5 199 aa8.96□□□□□ -0.97
COL12A1-202ENST00000345356 K7EQG2 157 aa8.96□□□□□ -0.98
COL12A1-202ENST00000345356 Q6ZQY7 126 aa8.96□□□□□ -0.98
COL12A1-202ENST00000345356 TRBV7-7A0A0K0K1E9 115 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 ATG2AQ2TAZ0 1938 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 WNK1Q9H4A3 2382 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 Q96MF0 132 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-202ENST00000345356 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 C22orf34Q6ZV56 151 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 DCANP1Q8TF63 244 aa8.95□□□□□ -0.98
COL12A1-202ENST00000345356 LY6LH3BQJ8 138 aa8.94□□□□□ -0.98
COL12A1-202ENST00000345356 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
COL12A1-202ENST00000345356 ARHGAP32A7KAX9 2087 aa8.94□□□□□ -0.98
COL12A1-202ENST00000345356 CRYGDP07320 174 aa8.94□□□□□ -0.98
COL12A1-202ENST00000345356 PRR14LQ5THK1 2151 aa8.94□□□□□ -0.98
COL12A1-202ENST00000345356 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 ADAMTSL4-AS1Q5T5F5 129 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-202ENST00000345356 TMEM89A2RUT3 159 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 WFDC10BQ8IUB3 73 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 C1orf158Q8N1D5 194 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 IGHV4-30-2A0A087WSY4 118 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 REG3AQ06141 175 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 PRO0461Q9UI25 63 aa8.93□□□□□ -0.98
COL12A1-202ENST00000345356 C2orf16Q68DN1 1984 aa8.92□□□□□ -0.98
COL12A1-202ENST00000345356 RETNQ9HD89 108 aa8.92□□□□□ -0.98
COL12A1-202ENST00000345356 COL4A4P53420 1690 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-202ENST00000345356 IGLV2-18A0A075B6J9 118 aa8.92□□□□□ -0.98
COL12A1-202ENST00000345356 A6NDX4 124 aa8.92□□□□□ -0.98
COL12A1-202ENST00000345356 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
COL12A1-202ENST00000345356 DEFB4AO15263 64 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 ZNF580Q9UK33 172 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 EML5Q05BV3 1969 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 C2CD3Q4AC94 2353 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 A0A1W2PNU3 283 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-202ENST00000345356 KLLNB2CW77 178 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 CCL18P55774 89 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 C9orf85Q96MD7 179 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
COL12A1-202ENST00000345356 NAV3Q8IVL0 2385 aa8.9□□□□□ -0.98
COL12A1-202ENST00000345356 A0A087WYN8 130 aa8.9□□□□□ -0.98
COL12A1-202ENST00000345356 EBI3Q14213 229 aa8.9□□□□□ -0.98
COL12A1-202ENST00000345356 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.99
COL12A1-202ENST00000345356 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.99
COL12A1-202ENST00000345356 TRBV6-8A0A0A6YYG3 113 aa8.89□□□□□ -0.99
COL12A1-202ENST00000345356 IL17DQ8TAD2 202 aa8.89□□□□□ -0.99
COL12A1-202ENST00000345356 UBE2AP49459 152 aa8.88□□□□□ -0.99
COL12A1-202ENST00000345356 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
COL12A1-202ENST00000345356 C4orf3Q8WVX3 66 aa8.88□□□□□ -0.99
COL12A1-202ENST00000345356 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
COL12A1-202ENST00000345356 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
COL12A1-202ENST00000345356 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
COL12A1-202ENST00000345356 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 FSTL3O95633 263 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 CRYGAP11844 174 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 PRYO14603 147 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 LINC00242Q5T6M2 205 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 SEC61GP60059 68 aa8.87□□□□□ -0.99
COL12A1-202ENST00000345356 Q8N3U1 123 aa8.86□□□□□ -0.99
COL12A1-202ENST00000345356 DEFB135Q30KP9 77 aa8.86□□□□□ -0.99
COL12A1-202ENST00000345356 PIP4P1Q86T03 277 aa8.86□□□□□ -0.99
COL12A1-202ENST00000345356 PSPHP1O15172 72 aa8.86□□□□□ -0.99
COL12A1-202ENST00000345356 HILS1P60008 231 aa8.86□□□□□ -0.99
COL12A1-202ENST00000345356 COX8CQ7Z4L0 72 aa8.86□□□□□ -0.99
COL12A1-202ENST00000345356 TRBV7-6A0A0J9YX20 115 aa8.85□□□□□ -0.99
COL12A1-202ENST00000345356 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
COL12A1-202ENST00000345356 Q8N814 137 aa8.85□□□□□ -0.99
COL12A1-202ENST00000345356 ANKHD1Q8IWZ3 2542 aaKnown RBP8.85□□□□□ -0.99
COL12A1-202ENST00000345356 RPS28P62857 69 aaKnown RBP8.85□□□□□ -0.99
COL12A1-202ENST00000345356 KIR2DL5BQ8NHK3 375 aa8.85□□□□□ -0.99
COL12A1-202ENST00000345356 HIGD2AQ9BW72 106 aa8.85□□□□□ -0.99
COL12A1-202ENST00000345356 PRM2P04554 102 aa8.84□□□□□ -0.99
COL12A1-202ENST00000345356 TRBV6-4A0A1B0GX49 114 aa8.84□□□□□ -0.99
COL12A1-202ENST00000345356 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
COL12A1-202ENST00000345356 NANOS2P60321 138 aaKnown RBP8.83□□□□□ -1
COL12A1-202ENST00000345356 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
COL12A1-202ENST00000345356 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
COL12A1-202ENST00000345356 COX6A2Q02221 97 aa8.83□□□□□ -1
COL12A1-202ENST00000345356 AGRNO00468 2067 aa8.83□□□□□ -1
COL12A1-202ENST00000345356 LMO4P61968 165 aa8.83□□□□□ -1
COL12A1-202ENST00000345356 Q8N6K4 173 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms