RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 A0A096LPF7 62 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 CCKP06307 115 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 LMO4P61968 165 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 USP17L23D6RBM5 183 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 MUC7Q8TAX7 377 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 BRI3O95415 125 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 SMCPP49901 116 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-203ENST00000343508 MRGPRG-AS1Q2M3A8 158 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 Q6JHZ5 121 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 FREM2Q5SZK8 3169 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 IGHV4-30-2A0A087WSY4 118 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 TRBV6-8A0A0A6YYG3 113 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 Q96MF0 132 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 PRORYQ9H606 182 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 TSPEAR-AS2P59090 65 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 ZDBF2Q9HCK1 2354 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 SBSPONQ8IVN8 264 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 Q6ZQT7 251 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
CSMD3-203ENST00000343508 EYSQ5T1H1 3165 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 CRYGAP11844 174 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 NRGNQ92686 78 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 POLEQ07864 2286 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 IGLV10-54A0A075B6I4 117 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 A8MZ25 164 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 IGLV1-40P01703 118 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 KLK5Q9Y337 293 aaPredicted RBP3.52□□□□□ -1.85
CSMD3-203ENST00000343508 PRO0255Q9UI72 69 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 DEFB105AQ8NG35 78 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 MAPK1IP1LQ8NDC0 245 aa3.52□□□□□ -1.85
CSMD3-203ENST00000343508 PLCE1Q9P212 2302 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 SMIM9A6NGZ8 99 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 PROK1P58294 105 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 PCNX1Q96RV3 2341 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 ABCA1O95477 2261 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
CSMD3-203ENST00000343508 ADAMTSL4-AS1Q5T5F5 129 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 CAMK2N2Q96S95 79 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 NDUFB1O75438 58 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 SPAG11BQ08648 103 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 RMI2Q96E14 147 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 CDC42SE2Q9NRR3 84 aa3.51□□□□□ -1.85
CSMD3-203ENST00000343508 MP68P56378 58 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 LINC00269Q8N2A0 174 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 PSCAO43653 123 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 WFDC9Q8NEX5 89 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 V9GYY9 64 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 Q6ZTI0 123 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 WDR87Q6ZQQ6 2873 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 TRIOO75962 3097 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 CHD7Q9P2D1 2997 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 TRAV7A0A075B6U4 112 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 SLPIP03973 132 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 MPLKIPQ8TAP9 179 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 REG3AQ06141 175 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 C9orf66Q5T8R8 295 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 CHCHD7Q9BUK0 85 aa3.5□□□□□ -1.85
CSMD3-203ENST00000343508 ROS1P08922 2347 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 SHISA2Q6UWI4 295 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 COX7BP24311 80 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 BPY2O14599 106 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 SPART-AS1P0CW21 52 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 COX6A2Q02221 97 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 DEFB113Q30KQ7 82 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 ZNF580Q9UK33 172 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 CACNA1GO43497 2377 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 IGKV2D-24A0A075B6R9 120 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 C6orf99Q4VX62 202 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 PKIGQ9Y2B9 76 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 SPTBN1Q01082 2364 aaKnown RBP3.49□□□□□ -1.85
CSMD3-203ENST00000343508 Q6YL49 198 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 LAMA1P25391 3075 aa3.49□□□□□ -1.85
CSMD3-203ENST00000343508 TECTAO75443 2155 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 TRBV10-3A0A0K0K1G6 114 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 UBE2BP63146 152 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 LYRM9A8MSI8 78 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 Q8IZM0 81 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 VPS13AQ96RL7 3174 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 TRIOBPQ9H2D6 2365 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 Q6ZSV7 163 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 Q8N814 137 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 ETDCA0A1B0GVM5 59 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 IGHV4-28A0A0C4DH34 117 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 A0A087WYN8 130 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-203ENST00000343508 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
CSMD3-203ENST00000343508 COL6A3P12111 3177 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 KIF25-AS1Q9Y6Z4 181 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 MAP1BP46821 2468 aaKnown RBP3.47□□□□□ -1.85
CSMD3-203ENST00000343508 CD164L2Q6UWJ8 174 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 FAM19A3Q7Z5A8 133 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms