RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.26□□□□□ -0.29
HOXA9-201ENST00000343483 A0A0J9YY99 117 aa13.26□□□□□ -0.29
HOXA9-201ENST00000343483 A0A1B0GWB2 263 aa13.26□□□□□ -0.29
HOXA9-201ENST00000343483 IGKV2-29A2NJV5 120 aaPredicted RBP13.26□□□□□ -0.29
HOXA9-201ENST00000343483 ZNF22P17026 224 aaPredicted RBP13.26□□□□□ -0.29
HOXA9-201ENST00000343483 PCP4P48539 62 aa13.26□□□□□ -0.29
HOXA9-201ENST00000343483 RPL36AP83881 106 aaKnown RBP13.25□□□□□ -0.29
HOXA9-201ENST00000343483 OCIAD2Q56VL3 154 aa13.25□□□□□ -0.29
HOXA9-201ENST00000343483 RPL36ALQ969Q0 106 aaKnown RBP13.25□□□□□ -0.29
HOXA9-201ENST00000343483 TRBV10-1A0A0K0K1A3 114 aa13.25□□□□□ -0.29
HOXA9-201ENST00000343483 LEPROTO15243 131 aa13.25□□□□□ -0.29
HOXA9-201ENST00000343483 FAM104AQ969W3 186 aa13.25□□□□□ -0.29
HOXA9-201ENST00000343483 AMELXQ99217 191 aa13.25□□□□□ -0.29
HOXA9-201ENST00000343483 A6NJY4 79 aa13.24□□□□□ -0.29
HOXA9-201ENST00000343483 RBX1P62877 108 aa13.24□□□□□ -0.29
HOXA9-201ENST00000343483 CRYBA4P53673 196 aa13.24□□□□□ -0.29
HOXA9-201ENST00000343483 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
HOXA9-201ENST00000343483 GAGE4Q13068 117 aa13.23□□□□□ -0.29
HOXA9-201ENST00000343483 GAGE5Q13069 117 aa13.23□□□□□ -0.29
HOXA9-201ENST00000343483 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
HOXA9-201ENST00000343483 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
HOXA9-201ENST00000343483 SPANXA1Q9NS26 97 aa13.23□□□□□ -0.29
HOXA9-201ENST00000343483 IGHV3-64A0A075B6Q5 118 aa13.22□□□□□ -0.29
HOXA9-201ENST00000343483 RNASE13Q5GAN3 156 aaKnown RBP13.22□□□□□ -0.29
HOXA9-201ENST00000343483 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
HOXA9-201ENST00000343483 TRGV4A0A0C4DH28 118 aa13.22□□□□□ -0.29
HOXA9-201ENST00000343483 C3orf56Q8N813 242 aa13.22□□□□□ -0.29
HOXA9-201ENST00000343483 SPANXB1Q9NS25 103 aaPredicted RBP13.22□□□□□ -0.29
HOXA9-201ENST00000343483 PKD1L1Q8TDX9 2849 aa13.21□□□□□ -0.29
HOXA9-201ENST00000343483 DEFB130BP0DP73 79 aa13.21□□□□□ -0.29
HOXA9-201ENST00000343483 DEFB130AP0DP74 79 aa13.21□□□□□ -0.29
HOXA9-201ENST00000343483 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
HOXA9-201ENST00000343483 RNF151Q2KHN1 245 aa13.2□□□□□ -0.3
HOXA9-201ENST00000343483 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
HOXA9-201ENST00000343483 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
HOXA9-201ENST00000343483 X6R8D5 127 aa13.2□□□□□ -0.3
HOXA9-201ENST00000343483 UBE2D3P61077 147 aa13.2□□□□□ -0.3
HOXA9-201ENST00000343483 UBE2D2P62837 147 aa13.2□□□□□ -0.3
HOXA9-201ENST00000343483 CIDEAO60543 219 aa13.19□□□□□ -0.3
HOXA9-201ENST00000343483 DEFB135Q30KP9 77 aa13.19□□□□□ -0.3
HOXA9-201ENST00000343483 LOC100131303A0A0U1RQF7 123 aa13.19□□□□□ -0.3
HOXA9-201ENST00000343483 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
HOXA9-201ENST00000343483 UBE2D1P51668 147 aa13.19□□□□□ -0.3
HOXA9-201ENST00000343483 APOC4P55056 127 aa13.19□□□□□ -0.3
HOXA9-201ENST00000343483 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
HOXA9-201ENST00000343483 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
HOXA9-201ENST00000343483 Q6ZUT4 128 aa13.18□□□□□ -0.3
HOXA9-201ENST00000343483 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
HOXA9-201ENST00000343483 PGPEP1Q9NXJ5 209 aa13.18□□□□□ -0.3
HOXA9-201ENST00000343483 SMIM9A6NGZ8 99 aa13.17□□□□□ -0.3
HOXA9-201ENST00000343483 K7ERU9 68 aa13.17□□□□□ -0.3
HOXA9-201ENST00000343483 FHL2Q14192 279 aa13.17□□□□□ -0.3
HOXA9-201ENST00000343483 TIMM21Q9BVV7 248 aa13.17□□□□□ -0.3
HOXA9-201ENST00000343483 APOMO95445 188 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 NTM-AS1Q6ZSK4 140 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 NBEAL2Q6ZNJ1 2754 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 WIPF1O43516 503 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 IGHV3-30-3P0DP02 117 aa13.16□□□□□ -0.3
HOXA9-201ENST00000343483 LINC00694P0DN24 101 aa13.14□□□□□ -0.31
HOXA9-201ENST00000343483 TRAV8-3A0A0A6YYJ7 113 aa13.13□□□□□ -0.31
HOXA9-201ENST00000343483 DEFB4AO15263 64 aa13.13□□□□□ -0.31
HOXA9-201ENST00000343483 IGHV4-30-4P0DP06 118 aa13.13□□□□□ -0.31
HOXA9-201ENST00000343483 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
HOXA9-201ENST00000343483 LINC00612Q8N6U2 182 aa13.13□□□□□ -0.31
HOXA9-201ENST00000343483 IGHV1-58A0A0C4DH39 117 aa13.12□□□□□ -0.31
HOXA9-201ENST00000343483 H3BMG7 143 aa13.12□□□□□ -0.31
HOXA9-201ENST00000343483 TSPAN13O95857 204 aa13.12□□□□□ -0.31
HOXA9-201ENST00000343483 FAM222AQ5U5X8 452 aa13.12□□□□□ -0.31
HOXA9-201ENST00000343483 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
HOXA9-201ENST00000343483 GEMIN7Q9H840 131 aaKnown RBP13.12□□□□□ -0.31
HOXA9-201ENST00000343483 CFC1BP0CG36 223 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 CFC1P0CG37 223 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 VPS25Q9BRG1 176 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 GTSF1LQ9H1H1 148 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 CMYA5Q8N3K9 4069 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 A0A0J9YXY3 114 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 C21orf62-AS1Q17RA5 79 aa13.11□□□□□ -0.31
HOXA9-201ENST00000343483 F8W1H4 67 aa13.1□□□□□ -0.31
HOXA9-201ENST00000343483 UBE2L6O14933 153 aa13.1□□□□□ -0.31
HOXA9-201ENST00000343483 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
HOXA9-201ENST00000343483 TMEM243Q9BU79 118 aa13.1□□□□□ -0.31
HOXA9-201ENST00000343483 IGHV4-28A0A0C4DH34 117 aa13.09□□□□□ -0.31
HOXA9-201ENST00000343483 SHISA2Q6UWI4 295 aa13.09□□□□□ -0.31
HOXA9-201ENST00000343483 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
HOXA9-201ENST00000343483 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
HOXA9-201ENST00000343483 LYRM9A8MSI8 78 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 LOC107984156A0A0G2JMH3 177 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 A4D1N5 150 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
HOXA9-201ENST00000343483 MUSTN1Q8IVN3 82 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 ARL17AQ8IVW1 177 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.32
HOXA9-201ENST00000343483 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
HOXA9-201ENST00000343483 NBEAL1Q6ZS30 2694 aa13.07□□□□□ -0.32
HOXA9-201ENST00000343483 TIRAPP58753 221 aa13.07□□□□□ -0.32
HOXA9-201ENST00000343483 WFDC2Q14508 124 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms