RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ITPR3Q14573 2671 aa6.95□□□□□ -1.3
TRERF1-201ENST00000340840 CFAP47Q6ZTR5 3102 aa6.95□□□□□ -1.3
TRERF1-201ENST00000340840 J3QLI3 93 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 RNF152Q8N8N0 203 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 FLNCQ14315 2725 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 MUC4Q99102 2169 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 ADGRG4Q8IZF6 3080 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 DAND5Q8N907 189 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 XCL2Q9UBD3 114 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 IGKV3OR2-268A0A0C4DH90 116 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 LY6G6DO95868 133 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 CRPP02741 224 aa6.94□□□□□ -1.3
TRERF1-201ENST00000340840 ACYP1P07311 99 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 MRPL23Q16540 153 aaKnown RBP6.93□□□□□ -1.3
TRERF1-201ENST00000340840 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 TRAV4A0A0B4J268 109 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 PROK1P58294 105 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 C10orf99Q6UWK7 81 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 AMELXQ99217 191 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 CDKN2A-AS1Q9UH64 79 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 ZNF580Q9UK33 172 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 TIMM17BO60830 172 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 IGHV3-53P01767 116 aa6.93□□□□□ -1.3
TRERF1-201ENST00000340840 LAMA5O15230 3695 aa6.92□□□□□ -1.3
TRERF1-201ENST00000340840 SLURP1P55000 103 aa6.92□□□□□ -1.3
TRERF1-201ENST00000340840 LINC00467Q9BRT7 94 aa6.92□□□□□ -1.3
TRERF1-201ENST00000340840 TRGV2A0A075B6R0 118 aa6.92□□□□□ -1.3
TRERF1-201ENST00000340840 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
TRERF1-201ENST00000340840 DEFB136Q30KP8 78 aa6.92□□□□□ -1.3
TRERF1-201ENST00000340840 A8MZ25 164 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 LST1O00453 97 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 ATRQ13535 2644 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 NDUFA1O15239 70 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 TIRAPP58753 221 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 H7C423 109 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 HERV-K104P63124 156 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 Q6Q795 121 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
TRERF1-201ENST00000340840 LINC00158P58513 81 aa6.9□□□□□ -1.3
TRERF1-201ENST00000340840 PIK3CD-AS1Q5SR53 167 aa6.9□□□□□ -1.3
TRERF1-201ENST00000340840 LRRC75A-AS1Q8N1F1 130 aa6.9□□□□□ -1.3
TRERF1-201ENST00000340840 CFHR3Q02985 330 aa6.9□□□□□ -1.31
TRERF1-201ENST00000340840 FHL3Q13643 280 aa6.9□□□□□ -1.31
TRERF1-201ENST00000340840 TRAV13-2A0A0B4J235 113 aa6.9□□□□□ -1.31
TRERF1-201ENST00000340840 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.31
TRERF1-201ENST00000340840 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.31
TRERF1-201ENST00000340840 TMEM243Q9BU79 118 aa6.9□□□□□ -1.31
TRERF1-201ENST00000340840 COX7A2LO14548 114 aa6.89□□□□□ -1.31
TRERF1-201ENST00000340840 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
TRERF1-201ENST00000340840 COL12A1Q99715 3063 aa6.89□□□□□ -1.31
TRERF1-201ENST00000340840 AVPP01185 164 aa6.89□□□□□ -1.31
TRERF1-201ENST00000340840 DEFB121Q5J5C9 76 aa6.89□□□□□ -1.31
TRERF1-201ENST00000340840 GAGE2AQ6NT46 116 aa6.89□□□□□ -1.31
TRERF1-201ENST00000340840 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 RBMY1BA6NDE4 496 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 RBMY1EA6NEQ0 496 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 RBMY1DP0C7P1 496 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 DAZ2Q13117 558 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 DAZ4Q86SG3 579 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 CITED1Q99966 193 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 DAZ3Q9NR90 486 aaKnown RBP6.88□□□□□ -1.31
TRERF1-201ENST00000340840 CHCHD5Q9BSY4 110 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 MAP6D1Q9H9H5 199 aa6.88□□□□□ -1.31
TRERF1-201ENST00000340840 TRBV10-1A0A0K0K1A3 114 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 EDA2RQ9HAV5 297 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 K7EQD1 137 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 RS1O15537 224 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 CRLF1O75462 422 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 PRM2P04554 102 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 CMC4P56277 68 aaPredicted RBP6.87□□□□□ -1.31
TRERF1-201ENST00000340840 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
TRERF1-201ENST00000340840 TACC2O95359 2948 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 PAX4O43316 350 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 Q6ZSV7 163 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
TRERF1-201ENST00000340840 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
TRERF1-201ENST00000340840 TRACP01848 142 aa6.85□□□□□ -1.31
TRERF1-201ENST00000340840 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
TRERF1-201ENST00000340840 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
TRERF1-201ENST00000340840 TMEM86BQ8N661 226 aa6.84□□□□□ -1.31
TRERF1-201ENST00000340840 LITAFQ99732 161 aa6.84□□□□□ -1.31
TRERF1-201ENST00000340840 ZNF702PQ9H963 129 aa6.84□□□□□ -1.31
TRERF1-201ENST00000340840 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
TRERF1-201ENST00000340840 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.31
TRERF1-201ENST00000340840 Q6YL49 198 aa6.84□□□□□ -1.31
TRERF1-201ENST00000340840 Q6ZSN1 163 aa6.84□□□□□ -1.31
TRERF1-201ENST00000340840 LINC00242Q5T6M2 205 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 NOP10Q9NPE3 64 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms