RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
BRAT1-201ENST00000340611 POM121L12Q8N7R1 296 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 COL6A5A8TX70 2615 aa11.11□□□□□ -0.63
BRAT1-201ENST00000340611 C2orf66Q6UXQ4 117 aa11.11□□□□□ -0.63
BRAT1-201ENST00000340611 DSCR8Q96T75 97 aa11.11□□□□□ -0.63
BRAT1-201ENST00000340611 SLC50A1Q9BRV3 221 aa11.11□□□□□ -0.63
BRAT1-201ENST00000340611 RS1O15537 224 aa11.11□□□□□ -0.63
BRAT1-201ENST00000340611 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
BRAT1-201ENST00000340611 C11orf86A6NJI1 115 aa11.1□□□□□ -0.63
BRAT1-201ENST00000340611 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
BRAT1-201ENST00000340611 TOMM6Q96B49 74 aa11.1□□□□□ -0.63
BRAT1-201ENST00000340611 K7EMT4 169 aa11.1□□□□□ -0.63
BRAT1-201ENST00000340611 LINC00526Q96FQ7 95 aa11.1□□□□□ -0.63
BRAT1-201ENST00000340611 H7C423 109 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 SOCS3O14543 225 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 SPATA3Q8NHX4 192 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 CLEC2BQ92478 149 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 TRBV7-7A0A0K0K1E9 115 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 TRIAP1O43715 76 aa11.09□□□□□ -0.63
BRAT1-201ENST00000340611 S100A4P26447 101 aaKnown RBP11.08□□□□□ -0.63
BRAT1-201ENST00000340611 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.63
BRAT1-201ENST00000340611 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
BRAT1-201ENST00000340611 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
BRAT1-201ENST00000340611 DCANP1Q8TF63 244 aa11.08□□□□□ -0.64
BRAT1-201ENST00000340611 TMEM263Q8WUH6 116 aaKnown RBP11.08□□□□□ -0.64
BRAT1-201ENST00000340611 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
BRAT1-201ENST00000340611 IGHV4-4A0A075B6R2 117 aa11.07□□□□□ -0.64
BRAT1-201ENST00000340611 A0A1B0GX51 115 aa11.07□□□□□ -0.64
BRAT1-201ENST00000340611 OXTP01178 125 aa11.07□□□□□ -0.64
BRAT1-201ENST00000340611 TMEM61Q8N0U2 210 aa11.07□□□□□ -0.64
BRAT1-201ENST00000340611 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
BRAT1-201ENST00000340611 NPC2P61916 151 aa11.06□□□□□ -0.64
BRAT1-201ENST00000340611 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
BRAT1-201ENST00000340611 PHLDA3Q9Y5J5 127 aa11.06□□□□□ -0.64
BRAT1-201ENST00000340611 TRAV8-3A0A0A6YYJ7 113 aa11.05□□□□□ -0.64
BRAT1-201ENST00000340611 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
BRAT1-201ENST00000340611 SMCR5Q8TEV8 140 aa11.05□□□□□ -0.64
BRAT1-201ENST00000340611 PRSS2P07478 247 aa11.05□□□□□ -0.64
BRAT1-201ENST00000340611 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
BRAT1-201ENST00000340611 CRYGDP07320 174 aa11.04□□□□□ -0.64
BRAT1-201ENST00000340611 LGALS3P17931 250 aaKnown RBP11.04□□□□□ -0.64
BRAT1-201ENST00000340611 DYNLRB2Q8TF09 96 aa11.04□□□□□ -0.64
BRAT1-201ENST00000340611 GNRH2O43555 120 aa11.04□□□□□ -0.64
BRAT1-201ENST00000340611 P0DMU3 169 aa11.04□□□□□ -0.64
BRAT1-201ENST00000340611 FAM231AP0DMU4 169 aa11.04□□□□□ -0.64
BRAT1-201ENST00000340611 FAM231CP0DMU5 169 aa11.04□□□□□ -0.64
BRAT1-201ENST00000340611 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 OVOL1O14753 267 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 TRACP01848 142 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 COX7CP15954 63 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 C1orf43Q9BWL3 253 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 PEMTQ9UBM1 199 aa11.03□□□□□ -0.64
BRAT1-201ENST00000340611 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.64
BRAT1-201ENST00000340611 TP53TG1Q9Y2A0 90 aa11.02□□□□□ -0.64
BRAT1-201ENST00000340611 J3QQQ9 107 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 TSHBP01222 138 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
BRAT1-201ENST00000340611 ZFAND2AQ8N6M9 145 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 K7EQG2 157 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 DEFB114Q30KQ6 69 aa11.02□□□□□ -0.65
BRAT1-201ENST00000340611 KRTAP24-1Q3LI83 254 aa11.01□□□□□ -0.65
BRAT1-201ENST00000340611 APRG1Q8IVJ8 170 aa11.01□□□□□ -0.65
BRAT1-201ENST00000340611 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
BRAT1-201ENST00000340611 PRIMA1Q86XR5 153 aa11.01□□□□□ -0.65
BRAT1-201ENST00000340611 JPT2Q9H910 190 aa11.01□□□□□ -0.65
BRAT1-201ENST00000340611 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
BRAT1-201ENST00000340611 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
BRAT1-201ENST00000340611 DEFB131AP59861 70 aa11□□□□□ -0.65
BRAT1-201ENST00000340611 RHOHQ15669 191 aa11□□□□□ -0.65
BRAT1-201ENST00000340611 FAM19A4Q96LR4 140 aa11□□□□□ -0.65
BRAT1-201ENST00000340611 TRAV21A0A0B4J279 112 aa10.99□□□□□ -0.65
BRAT1-201ENST00000340611 RPS28P62857 69 aaKnown RBP10.99□□□□□ -0.65
BRAT1-201ENST00000340611 NBEAL2Q6ZNJ1 2754 aa10.99□□□□□ -0.65
BRAT1-201ENST00000340611 PF4P02776 101 aa10.99□□□□□ -0.65
BRAT1-201ENST00000340611 TRAV12-2A0A075B6T6 113 aa10.98□□□□□ -0.65
BRAT1-201ENST00000340611 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
BRAT1-201ENST00000340611 Q5XG85 94 aa10.98□□□□□ -0.65
BRAT1-201ENST00000340611 ZNRF2Q8NHG8 242 aa10.98□□□□□ -0.65
BRAT1-201ENST00000340611 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
BRAT1-201ENST00000340611 WFDC10AQ9H1F0 79 aa10.98□□□□□ -0.65
BRAT1-201ENST00000340611 A0A087WWL8 130 aa10.97□□□□□ -0.65
BRAT1-201ENST00000340611 FAM240AA0A1B0GVK7 77 aa10.97□□□□□ -0.65
BRAT1-201ENST00000340611 RNASE3P12724 160 aaKnown RBP10.97□□□□□ -0.65
BRAT1-201ENST00000340611 SNRPD3P62318 126 aaKnown RBP10.97□□□□□ -0.65
BRAT1-201ENST00000340611 A0A0B4J2C4 111 aa10.97□□□□□ -0.65
BRAT1-201ENST00000340611 F5H697 171 aa10.96□□□□□ -0.65
BRAT1-201ENST00000340611 AMELXQ99217 191 aa10.96□□□□□ -0.65
BRAT1-201ENST00000340611 OPRPNQ99935 248 aaPredicted RBP10.96□□□□□ -0.65
BRAT1-201ENST00000340611 MUC4Q99102 2169 aa10.96□□□□□ -0.66
BRAT1-201ENST00000340611 IGIPA6NJ69 53 aa10.96□□□□□ -0.66
BRAT1-201ENST00000340611 CRYGAP11844 174 aa10.96□□□□□ -0.66
BRAT1-201ENST00000340611 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 H3BT86 120 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 COX6CP09669 75 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 TRBV30A0A0K0K1B3 111 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 RPL35AP18077 110 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms