RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 BVES-AS1Q5T3Y7 98 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 TMEM170BQ5T4T1 132 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 SAMD5Q5TGI4 173 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 TRAV8-6A0A0B4J262 113 aa11.42□□□□□ -0.58
HPS1-202ENST00000338546 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
HPS1-202ENST00000338546 CEMP1Q6PRD7 247 aaPredicted RBP11.42□□□□□ -0.58
HPS1-202ENST00000338546 FAM19A3Q7Z5A8 133 aa11.42□□□□□ -0.58
HPS1-202ENST00000338546 CMYA5Q8N3K9 4069 aa11.42□□□□□ -0.58
HPS1-202ENST00000338546 TRBV6-8A0A0A6YYG3 113 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 A0A0J9YXV3 536 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 UBE2L6O14933 153 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 ATP5G1P05496 136 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 Q6ZUT4 128 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 GYPEP15421 78 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
HPS1-202ENST00000338546 TIRAPP58753 221 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 SEC11AP67812 179 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 MAPKAPK5-AS1Q8N8E1 139 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 TMEM101Q96IK0 257 aa11.41□□□□□ -0.58
HPS1-202ENST00000338546 PAX4O43316 350 aa11.4□□□□□ -0.58
HPS1-202ENST00000338546 UBE2D1P51668 147 aa11.4□□□□□ -0.58
HPS1-202ENST00000338546 TAL2Q16559 108 aa11.4□□□□□ -0.58
HPS1-202ENST00000338546 OR5A1Q8NGJ0 315 aa11.4□□□□□ -0.58
HPS1-202ENST00000338546 G3V4G9 280 aa11.39□□□□□ -0.59
HPS1-202ENST00000338546 LEPROTO15243 131 aa11.39□□□□□ -0.59
HPS1-202ENST00000338546 AMMECR1LQ6DCA0 310 aa11.39□□□□□ -0.59
HPS1-202ENST00000338546 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
HPS1-202ENST00000338546 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
HPS1-202ENST00000338546 DEFB4AO15263 64 aa11.38□□□□□ -0.59
HPS1-202ENST00000338546 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
HPS1-202ENST00000338546 TTTY13Q9BZ97 58 aa11.38□□□□□ -0.59
HPS1-202ENST00000338546 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
HPS1-202ENST00000338546 SH2D6Q7Z4S9 175 aa11.37□□□□□ -0.59
HPS1-202ENST00000338546 C11orf68Q9H3H3 251 aaKnown RBP11.37□□□□□ -0.59
HPS1-202ENST00000338546 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
HPS1-202ENST00000338546 A0A1B0GV90 55 aa11.37□□□□□ -0.59
HPS1-202ENST00000338546 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
HPS1-202ENST00000338546 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
HPS1-202ENST00000338546 DNAH3Q8TD57 4116 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 ZNF815PA8K554 130 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 H3BRM9 83 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 J3QQQ9 107 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 HERVK_113P63121 156 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 ORAOV1Q8WV07 137 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 VSIG2Q96IQ7 327 aa11.36□□□□□ -0.59
HPS1-202ENST00000338546 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
HPS1-202ENST00000338546 RNASE13Q5GAN3 156 aaKnown RBP11.35□□□□□ -0.59
HPS1-202ENST00000338546 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
HPS1-202ENST00000338546 A6NDN8 102 aa11.34□□□□□ -0.59
HPS1-202ENST00000338546 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
HPS1-202ENST00000338546 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
HPS1-202ENST00000338546 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
HPS1-202ENST00000338546 CHCHD5Q9BSY4 110 aa11.33□□□□□ -0.6
HPS1-202ENST00000338546 F5H768 121 aa11.33□□□□□ -0.6
HPS1-202ENST00000338546 MRPL23Q16540 153 aaKnown RBP11.33□□□□□ -0.6
HPS1-202ENST00000338546 KPRPQ5T749 579 aaPredicted RBP11.33□□□□□ -0.6
HPS1-202ENST00000338546 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
HPS1-202ENST00000338546 ANK2Q01484 3957 aa11.32□□□□□ -0.6
HPS1-202ENST00000338546 H3BNG1 76 aa11.32□□□□□ -0.6
HPS1-202ENST00000338546 GAGE6Q13070 117 aa11.32□□□□□ -0.6
HPS1-202ENST00000338546 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
HPS1-202ENST00000338546 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
HPS1-202ENST00000338546 SCGB1D4Q6XE38 83 aa11.32□□□□□ -0.6
HPS1-202ENST00000338546 IGHV3-30-3P0DP02 117 aa11.31□□□□□ -0.6
HPS1-202ENST00000338546 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
HPS1-202ENST00000338546 CEND1Q8N111 149 aa11.31□□□□□ -0.6
HPS1-202ENST00000338546 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
HPS1-202ENST00000338546 ICOSQ9Y6W8 199 aa11.3□□□□□ -0.6
HPS1-202ENST00000338546 HIST1H4GQ99525 98 aa11.29□□□□□ -0.6
HPS1-202ENST00000338546 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
HPS1-202ENST00000338546 A0A0J9YY99 117 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 GCSHP23434 173 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 RETNQ9HD89 108 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 CCL25O15444 150 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
HPS1-202ENST00000338546 IGLV5-39A0A0G2JS06 123 aa11.27□□□□□ -0.61
HPS1-202ENST00000338546 COX6A2Q02221 97 aa11.27□□□□□ -0.61
HPS1-202ENST00000338546 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
HPS1-202ENST00000338546 PKD1L1Q8TDX9 2849 aa11.27□□□□□ -0.61
HPS1-202ENST00000338546 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
HPS1-202ENST00000338546 ZFAND6Q6FIF0 208 aa11.26□□□□□ -0.61
HPS1-202ENST00000338546 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
HPS1-202ENST00000338546 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
HPS1-202ENST00000338546 FXYD2P54710 66 aa11.25□□□□□ -0.61
HPS1-202ENST00000338546 RBX1P62877 108 aa11.25□□□□□ -0.61
HPS1-202ENST00000338546 LELP1Q5T871 98 aa11.25□□□□□ -0.61
HPS1-202ENST00000338546 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 TMEM262E9PQX1 116 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 SMIM13P0DJ93 91 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 HTN3P15516 51 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
HPS1-202ENST00000338546 TM2D3Q9BRN9 247 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 A0A096LPF7 62 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 TMEM238LA0A1B0GVL6 79 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 A6NJY4 79 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms