RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 LELP1Q5T871 98 aa6.78□□□□□ -1.32
FNDC3B-201ENST00000336824 Q6ZUT4 128 aa6.78□□□□□ -1.32
FNDC3B-201ENST00000336824 IGLC3P0DOY3 106 aa6.77□□□□□ -1.32
FNDC3B-201ENST00000336824 MPV17L2Q567V2 206 aa6.77□□□□□ -1.32
FNDC3B-201ENST00000336824 RNASE8Q8TDE3 154 aaKnown RBP6.77□□□□□ -1.32
FNDC3B-201ENST00000336824 NXPH4O95158 308 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 LURAP1LQ8IV03 231 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 PRB2P02812 416 aaPredicted RBP6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 PTH2Q96A98 100 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 IFITM1P13164 125 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 RPL18AQ02543 176 aaKnown RBP6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 SPAG11BQ08648 103 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 ODF1Q14990 250 aa6.77□□□□□ -1.33
FNDC3B-201ENST00000336824 C1orf158Q8N1D5 194 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 NRACQ8N912 160 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 F8WEM9 126 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 E9PLD3 99 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 NANOS2P60321 138 aaKnown RBP6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 CEND1Q8N111 149 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 CELSR3Q9NYQ7 3312 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 G3V4G9 280 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 MIAQ16674 131 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 EDA2RQ9HAV5 297 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 SCRT2Q9NQ03 307 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
FNDC3B-201ENST00000336824 SPATA12Q7Z6I5 190 aa6.75□□□□□ -1.33
FNDC3B-201ENST00000336824 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
FNDC3B-201ENST00000336824 NUPR1O60356 82 aa6.75□□□□□ -1.33
FNDC3B-201ENST00000336824 PGPEP1Q9NXJ5 209 aa6.75□□□□□ -1.33
FNDC3B-201ENST00000336824 GAGE12HA6NDE8 117 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 UBE2BP63146 152 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 TSPAN13O95857 204 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 PRO1854Q9UHT4 67 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 PRM2P04554 102 aa6.74□□□□□ -1.33
FNDC3B-201ENST00000336824 TRBV20-1A0A075B6N2 111 aa6.73□□□□□ -1.33
FNDC3B-201ENST00000336824 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
FNDC3B-201ENST00000336824 UBE2D3P61077 147 aa6.73□□□□□ -1.33
FNDC3B-201ENST00000336824 UBE2D2P62837 147 aa6.73□□□□□ -1.33
FNDC3B-201ENST00000336824 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
FNDC3B-201ENST00000336824 TSHBP01222 138 aa6.73□□□□□ -1.33
FNDC3B-201ENST00000336824 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 DMXL1Q9Y485 3027 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 USP34Q70CQ2 3546 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 RETNQ9HD89 108 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 TIRAPP58753 221 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 CHCHD7Q9BUK0 85 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 WFDC9Q8NEX5 89 aa6.72□□□□□ -1.33
FNDC3B-201ENST00000336824 DMXL2Q8TDJ6 3036 aa6.71□□□□□ -1.33
FNDC3B-201ENST00000336824 PCP2Q8IVA1 136 aa6.71□□□□□ -1.33
FNDC3B-201ENST00000336824 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.33
FNDC3B-201ENST00000336824 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 GAGE2EQ4V326 116 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 FAM19A4Q96LR4 140 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 GAGE2DQ9UEU5 116 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 RBX1P62877 108 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 BVES-AS1Q5T3Y7 98 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 DLEU1O43261 78 aa6.71□□□□□ -1.34
FNDC3B-201ENST00000336824 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
FNDC3B-201ENST00000336824 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
FNDC3B-201ENST00000336824 HIGD1BQ9P298 99 aa6.7□□□□□ -1.34
FNDC3B-201ENST00000336824 LOC100131303A0A0U1RQF7 123 aa6.7□□□□□ -1.34
FNDC3B-201ENST00000336824 A0A1B0GV90 55 aa6.7□□□□□ -1.34
FNDC3B-201ENST00000336824 FHL2Q14192 279 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 CHD6Q8TD26 2715 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 MAJINQ3KP22 176 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 SNHG12Q9BXW3 62 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 CD164L2Q6UWJ8 174 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 Q6ZTC4 211 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
FNDC3B-201ENST00000336824 GAGE2BQ13066 116 aa6.68□□□□□ -1.34
FNDC3B-201ENST00000336824 Q8N976 141 aa6.68□□□□□ -1.34
FNDC3B-201ENST00000336824 ETDCA0A1B0GVM5 59 aa6.67□□□□□ -1.34
FNDC3B-201ENST00000336824 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
FNDC3B-201ENST00000336824 H3BQ85 93 aa6.67□□□□□ -1.34
FNDC3B-201ENST00000336824 ZFAND6Q6FIF0 208 aa6.67□□□□□ -1.34
FNDC3B-201ENST00000336824 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
FNDC3B-201ENST00000336824 CDKN2A-AS1Q9UH64 79 aa6.67□□□□□ -1.34
FNDC3B-201ENST00000336824 LY6G6CO95867 125 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 C11orf72Q8NBR9 251 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 TMEM126AQ9H061 195 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 C12orf74Q32Q52 190 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 HIGD2BQ4VC39 106 aa6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 CSDC2Q9Y534 153 aaKnown RBP6.66□□□□□ -1.34
FNDC3B-201ENST00000336824 MIR7-3HGQ8N6C7 128 aa6.65□□□□□ -1.34
FNDC3B-201ENST00000336824 SPATA3Q8NHX4 192 aa6.65□□□□□ -1.34
FNDC3B-201ENST00000336824 CDC42SE2Q9NRR3 84 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms