RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 LRRC75A-AS1Q8N1F1 130 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.69□□□□□ -0.7
UBA1-201ENST00000335972 PRO1854Q9UHT4 67 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 GAGE12JA6NER3 117 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 GAGE4Q13068 117 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 GAGE5Q13069 117 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 CDKN2A-AS1Q9UH64 79 aa10.69□□□□□ -0.7
UBA1-201ENST00000335972 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
UBA1-201ENST00000335972 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
UBA1-201ENST00000335972 COX6A2Q02221 97 aa10.67□□□□□ -0.7
UBA1-201ENST00000335972 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
UBA1-201ENST00000335972 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
UBA1-201ENST00000335972 MRPS36P82909 103 aaKnown RBP10.67□□□□□ -0.7
UBA1-201ENST00000335972 LINC01006Q8NI28 216 aa10.67□□□□□ -0.7
UBA1-201ENST00000335972 IGKV3OR2-268A0A0C4DH90 116 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 UBE2D3P61077 147 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 UBE2D2P62837 147 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 RS1O15537 224 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 GAGE7O76087 117 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 PYGO1Q9Y3Y4 419 aa10.66□□□□□ -0.7
UBA1-201ENST00000335972 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.71
UBA1-201ENST00000335972 GAGE12HA6NDE8 117 aa10.65□□□□□ -0.71
UBA1-201ENST00000335972 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
UBA1-201ENST00000335972 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
UBA1-201ENST00000335972 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
UBA1-201ENST00000335972 ERG28Q9UKR5 140 aa10.64□□□□□ -0.71
UBA1-201ENST00000335972 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
UBA1-201ENST00000335972 NTM-AS1Q6ZSK4 140 aa10.63□□□□□ -0.71
UBA1-201ENST00000335972 LITAFQ99732 161 aa10.63□□□□□ -0.71
UBA1-201ENST00000335972 KRTAP1-1Q07627 177 aa10.62□□□□□ -0.71
UBA1-201ENST00000335972 FHL3Q13643 280 aa10.62□□□□□ -0.71
UBA1-201ENST00000335972 SPANXA1Q9NS26 97 aa10.62□□□□□ -0.71
UBA1-201ENST00000335972 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
UBA1-201ENST00000335972 C9JAW5 83 aa10.62□□□□□ -0.71
UBA1-201ENST00000335972 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
UBA1-201ENST00000335972 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
UBA1-201ENST00000335972 FOXI1Q12951 378 aa10.61□□□□□ -0.71
UBA1-201ENST00000335972 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
UBA1-201ENST00000335972 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
UBA1-201ENST00000335972 J3QR89 54 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 TMEM101Q96IK0 257 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 OTOGQ6ZRI0 2925 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 SIGMAR1Q99720 223 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 TENM1Q9UKZ4 2725 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 TMEM86BQ8N661 226 aa10.6□□□□□ -0.71
UBA1-201ENST00000335972 K7EQD1 137 aa10.59□□□□□ -0.71
UBA1-201ENST00000335972 RPL36AP83881 106 aaKnown RBP10.59□□□□□ -0.71
UBA1-201ENST00000335972 RPL36ALQ969Q0 106 aaKnown RBP10.59□□□□□ -0.71
UBA1-201ENST00000335972 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
UBA1-201ENST00000335972 LINC00242Q5T6M2 205 aa10.59□□□□□ -0.71
UBA1-201ENST00000335972 TRIAP1O43715 76 aa10.58□□□□□ -0.72
UBA1-201ENST00000335972 Q9H8V8 135 aa10.58□□□□□ -0.72
UBA1-201ENST00000335972 DNAJC30Q96LL9 226 aa10.58□□□□□ -0.72
UBA1-201ENST00000335972 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
UBA1-201ENST00000335972 ATRQ13535 2644 aa10.57□□□□□ -0.72
UBA1-201ENST00000335972 DEFB130BP0DP73 79 aa10.56□□□□□ -0.72
UBA1-201ENST00000335972 DEFB130AP0DP74 79 aa10.56□□□□□ -0.72
UBA1-201ENST00000335972 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
UBA1-201ENST00000335972 SLC25A20O43772 301 aa10.56□□□□□ -0.72
UBA1-201ENST00000335972 GAGE6Q13070 117 aa10.56□□□□□ -0.72
UBA1-201ENST00000335972 LYRM7Q5U5X0 104 aa10.56□□□□□ -0.72
UBA1-201ENST00000335972 A0A0B4J2C4 111 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 MIAQ16674 131 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 SPATA3Q8NHX4 192 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 TRGV4A0A0C4DH28 118 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 ZFAND6Q6FIF0 208 aa10.55□□□□□ -0.72
UBA1-201ENST00000335972 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.54□□□□□ -0.72
UBA1-201ENST00000335972 TRBV20-1A0A075B6N2 111 aa10.54□□□□□ -0.72
UBA1-201ENST00000335972 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
UBA1-201ENST00000335972 A0A096LPF7 62 aa10.54□□□□□ -0.72
UBA1-201ENST00000335972 UBE2L6O14933 153 aa10.54□□□□□ -0.72
UBA1-201ENST00000335972 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
UBA1-201ENST00000335972 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
UBA1-201ENST00000335972 C19orf73Q9NVV2 129 aa10.53□□□□□ -0.72
UBA1-201ENST00000335972 TOMM7Q9P0U1 55 aa10.53□□□□□ -0.72
UBA1-201ENST00000335972 A0A1B0GV72 72 aa10.52□□□□□ -0.72
UBA1-201ENST00000335972 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.72
UBA1-201ENST00000335972 CRYBA4P53673 196 aa10.52□□□□□ -0.72
UBA1-201ENST00000335972 KRTAP10-3P60369 221 aa10.52□□□□□ -0.72
UBA1-201ENST00000335972 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.72
UBA1-201ENST00000335972 CDIP1Q9H305 208 aa10.52□□□□□ -0.72
UBA1-201ENST00000335972 TRRAPQ9Y4A5 3859 aa10.52□□□□□ -0.72
UBA1-201ENST00000335972 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
UBA1-201ENST00000335972 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
UBA1-201ENST00000335972 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
UBA1-201ENST00000335972 MT-ATP8P03928 68 aa10.52□□□□□ -0.73
UBA1-201ENST00000335972 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.73
UBA1-201ENST00000335972 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.73
UBA1-201ENST00000335972 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
UBA1-201ENST00000335972 DEFB4AO15263 64 aa10.51□□□□□ -0.73
UBA1-201ENST00000335972 SPATA25Q9BR10 227 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms