RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GIG44P09565 113 aaPredicted RBP16.01■□□□□ 0.15
PNKP-201ENST00000322344 HILS1P60008 231 aa16.01■□□□□ 0.15
PNKP-201ENST00000322344 ERG28Q9UKR5 140 aa16.01■□□□□ 0.15
PNKP-201ENST00000322344 ADARB2-AS1A8MUL3 147 aa16■□□□□ 0.15
PNKP-201ENST00000322344 J3QKU1 62 aa16■□□□□ 0.15
PNKP-201ENST00000322344 CIDEAO60543 219 aa16■□□□□ 0.15
PNKP-201ENST00000322344 PLA2G2AP14555 144 aa16■□□□□ 0.15
PNKP-201ENST00000322344 AKAP9Q99996 3911 aa16■□□□□ 0.15
PNKP-201ENST00000322344 TCL1BO95988 128 aa15.99■□□□□ 0.15
PNKP-201ENST00000322344 SCGB1C2P0DMR2 95 aa15.99■□□□□ 0.15
PNKP-201ENST00000322344 FAM19A3Q7Z5A8 133 aa15.99■□□□□ 0.15
PNKP-201ENST00000322344 TIMM17BO60830 172 aa15.99■□□□□ 0.15
PNKP-201ENST00000322344 HERVK_113P63121 156 aa15.99■□□□□ 0.15
PNKP-201ENST00000322344 NOP10Q9NPE3 64 aaKnown RBP15.99■□□□□ 0.15
PNKP-201ENST00000322344 C19orf73Q9NVV2 129 aa15.99■□□□□ 0.15
PNKP-201ENST00000322344 EIF4EBP3O60516 100 aaPredicted RBP15.98■□□□□ 0.15
PNKP-201ENST00000322344 CDKN2A-AS1Q9UH64 79 aa15.98■□□□□ 0.15
PNKP-201ENST00000322344 SMCPP49901 116 aaPredicted RBP15.97■□□□□ 0.15
PNKP-201ENST00000322344 ZNF469Q96JG9 3925 aaPredicted RBP15.97■□□□□ 0.15
PNKP-201ENST00000322344 EPG5Q9HCE0 2579 aa15.97■□□□□ 0.15
PNKP-201ENST00000322344 MIAQ16674 131 aa15.97■□□□□ 0.15
PNKP-201ENST00000322344 SBSPONQ8IVN8 264 aa15.96■□□□□ 0.15
PNKP-201ENST00000322344 PLAC8L1A1L4L8 177 aa15.95■□□□□ 0.14
PNKP-201ENST00000322344 NDUFA1O15239 70 aa15.95■□□□□ 0.14
PNKP-201ENST00000322344 RPL35AP18077 110 aaKnown RBP15.95■□□□□ 0.14
PNKP-201ENST00000322344 NTM-AS1Q6ZSK4 140 aa15.95■□□□□ 0.14
PNKP-201ENST00000322344 RNF183Q96D59 192 aa15.95■□□□□ 0.14
PNKP-201ENST00000322344 OVOL2Q9BRP0 275 aa15.95■□□□□ 0.14
PNKP-201ENST00000322344 GTSF1LQ9H1H1 148 aa15.95■□□□□ 0.14
PNKP-201ENST00000322344 GAGE12JA6NER3 117 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 PRSS2P07478 247 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 GAGE4Q13068 117 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 GAGE5Q13069 117 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 TMEM101Q96IK0 257 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 TLN2Q9Y4G6 2542 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 LINC00242Q5T6M2 205 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 WFDC10AQ9H1F0 79 aa15.94■□□□□ 0.14
PNKP-201ENST00000322344 A8MZ25 164 aa15.93■□□□□ 0.14
PNKP-201ENST00000322344 LINC00694P0DN24 101 aa15.93■□□□□ 0.14
PNKP-201ENST00000322344 IFITM1P13164 125 aa15.93■□□□□ 0.14
PNKP-201ENST00000322344 ADAMTSL4-AS1Q5T5F5 129 aa15.93■□□□□ 0.14
PNKP-201ENST00000322344 CSNK1G2-AS1Q8NCQ2 148 aa15.93■□□□□ 0.14
PNKP-201ENST00000322344 TRGV2A0A075B6R0 118 aa15.92■□□□□ 0.14
PNKP-201ENST00000322344 IGLV5-39A0A0G2JS06 123 aa15.92■□□□□ 0.14
PNKP-201ENST00000322344 SONP18583 2426 aaKnown RBP15.92■□□□□ 0.14
PNKP-201ENST00000322344 TRBV6-4A0A1B0GX49 114 aa15.92■□□□□ 0.14
PNKP-201ENST00000322344 COX6A2Q02221 97 aa15.92■□□□□ 0.14
PNKP-201ENST00000322344 FOXI1Q12951 378 aa15.92■□□□□ 0.14
PNKP-201ENST00000322344 Q1RN00 199 aa15.92■□□□□ 0.14
PNKP-201ENST00000322344 GAGE7O76087 117 aa15.91■□□□□ 0.14
PNKP-201ENST00000322344 GAGE12FP0CL80 117 aa15.91■□□□□ 0.14
PNKP-201ENST00000322344 GAGE12GP0CL81 117 aa15.91■□□□□ 0.14
PNKP-201ENST00000322344 GAGE12IP0CL82 117 aa15.91■□□□□ 0.14
PNKP-201ENST00000322344 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.91■□□□□ 0.14
PNKP-201ENST00000322344 FLNAP21333 2647 aaKnown RBP15.91■□□□□ 0.14
PNKP-201ENST00000322344 GAGE12HA6NDE8 117 aa15.9■□□□□ 0.14
PNKP-201ENST00000322344 SPATA25Q9BR10 227 aa15.9■□□□□ 0.14
PNKP-201ENST00000322344 TMEM243Q9BU79 118 aa15.9■□□□□ 0.14
PNKP-201ENST00000322344 H7C423 109 aa15.9■□□□□ 0.14
PNKP-201ENST00000322344 CDC42SE2Q9NRR3 84 aa15.9■□□□□ 0.14
PNKP-201ENST00000322344 CHD6Q8TD26 2715 aa15.9■□□□□ 0.14
PNKP-201ENST00000322344 TRBV30A0A0K0K1B3 111 aa15.89■□□□□ 0.13
PNKP-201ENST00000322344 H7C2G1 150 aa15.89■□□□□ 0.13
PNKP-201ENST00000322344 CIRBPQ14011 172 aaKnown RBP15.89■□□□□ 0.13
PNKP-201ENST00000322344 TEN1Q86WV5 123 aa15.89■□□□□ 0.13
PNKP-201ENST00000322344 M0QXV9 152 aa15.89■□□□□ 0.13
PNKP-201ENST00000322344 UBE2L6O14933 153 aa15.89■□□□□ 0.13
PNKP-201ENST00000322344 INSL3P51460 131 aa15.87■□□□□ 0.13
PNKP-201ENST00000322344 PPDPFLQ8WWR9 84 aa15.87■□□□□ 0.13
PNKP-201ENST00000322344 SIGMAR1Q99720 223 aa15.87■□□□□ 0.13
PNKP-201ENST00000322344 TRAV13-1A0A0B4J241 112 aa15.86■□□□□ 0.13
PNKP-201ENST00000322344 TRGV4A0A0C4DH28 118 aa15.86■□□□□ 0.13
PNKP-201ENST00000322344 ATXN8Q156A1 80 aa15.86■□□□□ 0.13
PNKP-201ENST00000322344 PDZD2O15018 2839 aa15.86■□□□□ 0.13
PNKP-201ENST00000322344 SMIM1B2RUZ4 78 aa15.85■□□□□ 0.13
PNKP-201ENST00000322344 NBPF19A0A087WUL8 3843 aa15.85■□□□□ 0.13
PNKP-201ENST00000322344 ANK3Q12955 4377 aaKnown RBP15.85■□□□□ 0.13
PNKP-201ENST00000322344 Q9H8V8 135 aa15.84■□□□□ 0.13
PNKP-201ENST00000322344 WNK1Q9H4A3 2382 aa15.84■□□□□ 0.13
PNKP-201ENST00000322344 COPS9Q8WXC6 57 aa15.84■□□□□ 0.13
PNKP-201ENST00000322344 CCDC168Q8NDH2 2452 aa15.83■□□□□ 0.12
PNKP-201ENST00000322344 SLC25A20O43772 301 aa15.83■□□□□ 0.12
PNKP-201ENST00000322344 TRIAP1O43715 76 aa15.82■□□□□ 0.12
PNKP-201ENST00000322344 PF4P02776 101 aa15.82■□□□□ 0.12
PNKP-201ENST00000322344 ICOSQ9Y6W8 199 aa15.82■□□□□ 0.12
PNKP-201ENST00000322344 C9JAW5 83 aa15.82■□□□□ 0.12
PNKP-201ENST00000322344 TENM4Q6N022 2769 aa15.82■□□□□ 0.12
PNKP-201ENST00000322344 F5H768 121 aa15.81■□□□□ 0.12
PNKP-201ENST00000322344 NPC2P61916 151 aa15.81■□□□□ 0.12
PNKP-201ENST00000322344 FHL2Q14192 279 aa15.81■□□□□ 0.12
PNKP-201ENST00000322344 LOC100131303A0A0U1RQF7 123 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 COX6CP09669 75 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 SCGB1A1P11684 91 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 LINC00482Q8N8I6 264 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 HERV-K104P63124 156 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 ANKRD29Q8N6D5 301 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 CARD19Q96LW7 228 aa15.8■□□□□ 0.12
PNKP-201ENST00000322344 LINC01620Q4KN68 170 aa15.79■□□□□ 0.12
PNKP-201ENST00000322344 LINC01600Q96MT4 127 aa15.79■□□□□ 0.12
PNKP-201ENST00000322344 KRTAP10-3P60369 221 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms