RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 A0A087WVE0 104 aa6.61□□□□□ -1.35
USF3-201ENST00000316407 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
USF3-201ENST00000316407 PKD1L2Q7Z442 2459 aa6.61□□□□□ -1.35
USF3-201ENST00000316407 YPEL4Q96NS1 127 aa6.61□□□□□ -1.35
USF3-201ENST00000316407 XAGE1AQ9HD64 81 aa6.61□□□□□ -1.35
USF3-201ENST00000316407 ZFAND2AQ8N6M9 145 aa6.61□□□□□ -1.35
USF3-201ENST00000316407 PPDPFQ9H3Y8 114 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 Q8N9W7 124 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 B9D2Q9BPU9 175 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 Q8N976 141 aa6.6□□□□□ -1.35
USF3-201ENST00000316407 TRBV6-1A0A0K0K1D8 114 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 C9orf85Q96MD7 179 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 KAAG1Q9UBP8 84 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 IGLV1-44P01699 117 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 Q6ZS46 218 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 C17orf82Q86X59 251 aaPredicted RBP6.59□□□□□ -1.35
USF3-201ENST00000316407 ODF3L1Q8IXM7 274 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 MBD6Q96DN6 1003 aa6.59□□□□□ -1.35
USF3-201ENST00000316407 RNF138Q8WVD3 245 aa6.59□□□□□ -1.36
USF3-201ENST00000316407 IGKV1D-37A0A075B6S9 117 aa6.59□□□□□ -1.36
USF3-201ENST00000316407 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 LST1O00453 97 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 C11orf1Q9H5F2 150 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 REG3AQ06141 175 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 ZNF22P17026 224 aaPredicted RBP6.58□□□□□ -1.36
USF3-201ENST00000316407 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
USF3-201ENST00000316407 FAM215AQ9Y5M1 114 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 EBI3Q14213 229 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
USF3-201ENST00000316407 SMIM26A0A096LP01 95 aa6.57□□□□□ -1.36
USF3-201ENST00000316407 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
USF3-201ENST00000316407 CENPFP49454 3210 aa6.57□□□□□ -1.36
USF3-201ENST00000316407 PCSK5Q92824 1860 aa6.57□□□□□ -1.36
USF3-201ENST00000316407 CCL18P55774 89 aa6.57□□□□□ -1.36
USF3-201ENST00000316407 SMIM11BQ8TCY0 68 aa6.57□□□□□ -1.36
USF3-201ENST00000316407 PROK1P58294 105 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 Q6ZTI0 123 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 Q6ZS92 163 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 C6orf99Q4VX62 202 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 COL4A3Q01955 1670 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 A0A087WZ39 114 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
USF3-201ENST00000316407 GAS8-AS1O95177 125 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 Q6ZQY7 126 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
USF3-201ENST00000316407 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 H3BUA1 57 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 PRYO14603 147 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 ABCA12Q86UK0 2595 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 Q6ZSV7 163 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 WFDC10AQ9H1F0 79 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 U3KQK5 164 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 CRYGAP11844 174 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 VPREB1P12018 145 aa6.55□□□□□ -1.36
USF3-201ENST00000316407 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
USF3-201ENST00000316407 Q8N9L7 120 aa6.54□□□□□ -1.36
USF3-201ENST00000316407 C4orf26Q17RF5 130 aa6.54□□□□□ -1.36
USF3-201ENST00000316407 MRPS36P82909 103 aaKnown RBP6.54□□□□□ -1.36
USF3-201ENST00000316407 A0A0J9YX75 114 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 LY6G6EA0A0G2JKS1 128 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 U3KQA8 63 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 UFSP1Q6NVU6 142 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 FAM222AQ5U5X8 452 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 RNF185Q96GF1 192 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 NRGNQ92686 78 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 NRACQ8N912 160 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 CRIP1P50238 77 aa6.53□□□□□ -1.36
USF3-201ENST00000316407 IGF2RP11717 2491 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 J3QLI3 93 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 ZFP36P26651 326 aaKnown RBP6.52□□□□□ -1.37
USF3-201ENST00000316407 SP5Q6BEB4 398 aaPredicted RBP6.52□□□□□ -1.37
USF3-201ENST00000316407 RETNLBQ9BQ08 111 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 X6R8D5 127 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 IBA57-AS1B1ANH7 110 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 M0QY20 66 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 PRRC2CQ9Y520 2896 aaKnown RBP6.52□□□□□ -1.37
USF3-201ENST00000316407 KRTAP27-1Q3LI81 207 aa6.52□□□□□ -1.37
USF3-201ENST00000316407 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
USF3-201ENST00000316407 ANKRD17O75179 2603 aaKnown RBP6.51□□□□□ -1.37
USF3-201ENST00000316407 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
USF3-201ENST00000316407 Q6JHZ5 121 aa6.51□□□□□ -1.37
USF3-201ENST00000316407 Q6ZPA2 131 aa6.51□□□□□ -1.37
USF3-201ENST00000316407 CRYGDP07320 174 aa6.51□□□□□ -1.37
USF3-201ENST00000316407 ESRGQ1W209 222 aa6.51□□□□□ -1.37
USF3-201ENST00000316407 A0A087WYN8 130 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 IGLV2-11P01706 119 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 MYCNOSP40205 109 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms