RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 RAB37Q96AX2 223 aa13.12□□□□□ -0.31
HCLS1-201ENST00000314583 SPANXB1Q9NS25 103 aaPredicted RBP13.12□□□□□ -0.31
HCLS1-201ENST00000314583 A0A0J9YY99 117 aa13.12□□□□□ -0.31
HCLS1-201ENST00000314583 H3BUT2 72 aa13.12□□□□□ -0.31
HCLS1-201ENST00000314583 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
HCLS1-201ENST00000314583 FLNBO75369 2602 aaKnown RBP13.11□□□□□ -0.31
HCLS1-201ENST00000314583 APOC4P55056 127 aa13.11□□□□□ -0.31
HCLS1-201ENST00000314583 FHL2Q14192 279 aa13.11□□□□□ -0.31
HCLS1-201ENST00000314583 RNASE13Q5GAN3 156 aaKnown RBP13.11□□□□□ -0.31
HCLS1-201ENST00000314583 NTM-AS1Q6ZSK4 140 aa13.11□□□□□ -0.31
HCLS1-201ENST00000314583 X6R8D5 127 aa13.11□□□□□ -0.31
HCLS1-201ENST00000314583 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
HCLS1-201ENST00000314583 A6NJY4 79 aa13.1□□□□□ -0.31
HCLS1-201ENST00000314583 UBE2D1P51668 147 aa13.1□□□□□ -0.31
HCLS1-201ENST00000314583 OR5A1Q8NGJ0 315 aa13.1□□□□□ -0.31
HCLS1-201ENST00000314583 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
HCLS1-201ENST00000314583 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
HCLS1-201ENST00000314583 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
HCLS1-201ENST00000314583 A0A1B0GWB2 263 aa13.09□□□□□ -0.31
HCLS1-201ENST00000314583 H7C423 109 aa13.09□□□□□ -0.31
HCLS1-201ENST00000314583 TIRAPP58753 221 aa13.09□□□□□ -0.31
HCLS1-201ENST00000314583 GTF2H5Q6ZYL4 71 aa13.09□□□□□ -0.31
HCLS1-201ENST00000314583 TMEM243Q9BU79 118 aa13.09□□□□□ -0.31
HCLS1-201ENST00000314583 GEMIN7Q9H840 131 aaKnown RBP13.09□□□□□ -0.31
HCLS1-201ENST00000314583 C12orf74Q32Q52 190 aa13.08□□□□□ -0.31
HCLS1-201ENST00000314583 IGHV1-58A0A0C4DH39 117 aa13.08□□□□□ -0.32
HCLS1-201ENST00000314583 A0A1W2PPM0 123 aa13.08□□□□□ -0.32
HCLS1-201ENST00000314583 UBE2L6O14933 153 aa13.07□□□□□ -0.32
HCLS1-201ENST00000314583 FAM19A3Q7Z5A8 133 aa13.07□□□□□ -0.32
HCLS1-201ENST00000314583 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 GAGE10A6NGK3 116 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 K7ERJ3 54 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 LINC00694P0DN24 101 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 IGHV3-30-3P0DP02 117 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 LYRM9A8MSI8 78 aa13.06□□□□□ -0.32
HCLS1-201ENST00000314583 TEP1Q99973 2627 aaKnown RBP13.06□□□□□ -0.32
HCLS1-201ENST00000314583 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 K7EP34 96 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 FABP2P12104 132 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 HERVK_113P63121 156 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 VWFP04275 2813 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 DEFB130BP0DP73 79 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 DEFB130AP0DP74 79 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 TMEM101Q96IK0 257 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
HCLS1-201ENST00000314583 PRIMA1Q86XR5 153 aa13.03□□□□□ -0.32
HCLS1-201ENST00000314583 NAA38Q9BRA0 125 aaKnown RBP13.03□□□□□ -0.32
HCLS1-201ENST00000314583 CDC42SE2Q9NRR3 84 aa13.03□□□□□ -0.32
HCLS1-201ENST00000314583 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
HCLS1-201ENST00000314583 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
HCLS1-201ENST00000314583 IGLL5B9A064 214 aa13.02□□□□□ -0.33
HCLS1-201ENST00000314583 TMEM238C9JI98 176 aa13.02□□□□□ -0.33
HCLS1-201ENST00000314583 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.33
HCLS1-201ENST00000314583 BAHCC1Q9P281 2608 aa13.02□□□□□ -0.33
HCLS1-201ENST00000314583 TRAV8-3A0A0A6YYJ7 113 aa13.01□□□□□ -0.33
HCLS1-201ENST00000314583 DEFB135Q30KP9 77 aa13.01□□□□□ -0.33
HCLS1-201ENST00000314583 SPCS1Q9Y6A9 102 aa13.01□□□□□ -0.33
HCLS1-201ENST00000314583 ATRQ13535 2644 aa13.01□□□□□ -0.33
HCLS1-201ENST00000314583 SPINK8P0C7L1 97 aa13.01□□□□□ -0.33
HCLS1-201ENST00000314583 CDKN2A-AS1Q9UH64 79 aa13.01□□□□□ -0.33
HCLS1-201ENST00000314583 TRBV6-8A0A0A6YYG3 113 aa13□□□□□ -0.33
HCLS1-201ENST00000314583 LINC00242Q5T6M2 205 aa13□□□□□ -0.33
HCLS1-201ENST00000314583 C10orf126Q8N4M7 172 aa13□□□□□ -0.33
HCLS1-201ENST00000314583 A0A0J9YXY3 114 aa13□□□□□ -0.33
HCLS1-201ENST00000314583 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
HCLS1-201ENST00000314583 SHISA2Q6UWI4 295 aa13□□□□□ -0.33
HCLS1-201ENST00000314583 MIFP14174 115 aa12.99□□□□□ -0.33
HCLS1-201ENST00000314583 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
HCLS1-201ENST00000314583 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
HCLS1-201ENST00000314583 PRO0255Q9UI72 69 aa12.99□□□□□ -0.33
HCLS1-201ENST00000314583 C3orf56Q8N813 242 aa12.98□□□□□ -0.33
HCLS1-201ENST00000314583 IGHV4-28A0A0C4DH34 117 aa12.96□□□□□ -0.33
HCLS1-201ENST00000314583 GYPEP15421 78 aa12.96□□□□□ -0.33
HCLS1-201ENST00000314583 COX6A2Q02221 97 aa12.96□□□□□ -0.33
HCLS1-201ENST00000314583 ATP6V0E2Q8NHE4 81 aa12.96□□□□□ -0.33
HCLS1-201ENST00000314583 TRAV13-1A0A0B4J241 112 aa12.96□□□□□ -0.34
HCLS1-201ENST00000314583 IGLV5-39A0A0G2JS06 123 aa12.96□□□□□ -0.34
HCLS1-201ENST00000314583 IGHV4-30-4P0DP06 118 aa12.96□□□□□ -0.34
HCLS1-201ENST00000314583 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.34
HCLS1-201ENST00000314583 GAGE6Q13070 117 aa12.95□□□□□ -0.34
HCLS1-201ENST00000314583 RNF183Q96D59 192 aa12.95□□□□□ -0.34
HCLS1-201ENST00000314583 NDUFA1O15239 70 aa12.95□□□□□ -0.34
HCLS1-201ENST00000314583 Q8NAQ8 132 aa12.95□□□□□ -0.34
HCLS1-201ENST00000314583 CHCHD5Q9BSY4 110 aa12.95□□□□□ -0.34
HCLS1-201ENST00000314583 TIMM17BO60830 172 aa12.94□□□□□ -0.34
HCLS1-201ENST00000314583 SPANXDQ9BXN6 97 aa12.94□□□□□ -0.34
HCLS1-201ENST00000314583 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
HCLS1-201ENST00000314583 SPANXCQ9NY87 97 aa12.94□□□□□ -0.34
HCLS1-201ENST00000314583 DAD1P61803 113 aa12.93□□□□□ -0.34
HCLS1-201ENST00000314583 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
HCLS1-201ENST00000314583 PAX4O43316 350 aa12.93□□□□□ -0.34
HCLS1-201ENST00000314583 APOMO95445 188 aa12.93□□□□□ -0.34
HCLS1-201ENST00000314583 LITAFQ99732 161 aa12.93□□□□□ -0.34
HCLS1-201ENST00000314583 SMIM1B2RUZ4 78 aa12.92□□□□□ -0.34
HCLS1-201ENST00000314583 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
HCLS1-201ENST00000314583 EGFEM1PQ0D2K5 195 aa12.92□□□□□ -0.34
HCLS1-201ENST00000314583 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.91□□□□□ -0.34
HCLS1-201ENST00000314583 CFC1BP0CG36 223 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms