RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
PTPN2-201ENST00000309660 AKAP9Q99996 3911 aa8.31□□□□□ -1.08
PTPN2-201ENST00000309660 G3V4G9 280 aa8.31□□□□□ -1.08
PTPN2-201ENST00000309660 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
PTPN2-201ENST00000309660 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
PTPN2-201ENST00000309660 NDUFA12Q9UI09 145 aa8.31□□□□□ -1.08
PTPN2-201ENST00000309660 PYGO1Q9Y3Y4 419 aa8.31□□□□□ -1.08
PTPN2-201ENST00000309660 A0A0J9YXY3 114 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 F8W1H4 67 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 LINC00694P0DN24 101 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 DAND5Q8N907 189 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 SPANXA1Q9NS26 97 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 CDKN2A-AS1Q9UH64 79 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 RNASE1P07998 156 aaKnown RBP8.3□□□□□ -1.08
PTPN2-201ENST00000309660 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
PTPN2-201ENST00000309660 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
PTPN2-201ENST00000309660 PF4P02776 101 aa8.29□□□□□ -1.08
PTPN2-201ENST00000309660 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
PTPN2-201ENST00000309660 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
PTPN2-201ENST00000309660 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
PTPN2-201ENST00000309660 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 K7EQD1 137 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 PTH2Q96A98 100 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 INSL3P51460 131 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 PIK3CD-AS1Q5SR53 167 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
PTPN2-201ENST00000309660 TRGV4A0A0C4DH28 118 aa8.27□□□□□ -1.08
PTPN2-201ENST00000309660 DEFB130BP0DP73 79 aa8.27□□□□□ -1.08
PTPN2-201ENST00000309660 DEFB130AP0DP74 79 aa8.27□□□□□ -1.08
PTPN2-201ENST00000309660 UBE2L6O14933 153 aa8.27□□□□□ -1.09
PTPN2-201ENST00000309660 TCL1BO95988 128 aa8.27□□□□□ -1.09
PTPN2-201ENST00000309660 COX6A2Q02221 97 aa8.27□□□□□ -1.09
PTPN2-201ENST00000309660 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
PTPN2-201ENST00000309660 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
PTPN2-201ENST00000309660 ERG28Q9UKR5 140 aa8.27□□□□□ -1.09
PTPN2-201ENST00000309660 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
PTPN2-201ENST00000309660 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
PTPN2-201ENST00000309660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.26□□□□□ -1.09
PTPN2-201ENST00000309660 IGLV1-51P01701 117 aa8.26□□□□□ -1.09
PTPN2-201ENST00000309660 LYRM7Q5U5X0 104 aa8.26□□□□□ -1.09
PTPN2-201ENST00000309660 J3QR89 54 aa8.26□□□□□ -1.09
PTPN2-201ENST00000309660 HILS1P60008 231 aa8.26□□□□□ -1.09
PTPN2-201ENST00000309660 NTM-AS1Q6ZSK4 140 aa8.26□□□□□ -1.09
PTPN2-201ENST00000309660 ATRQ13535 2644 aa8.25□□□□□ -1.09
PTPN2-201ENST00000309660 GTSF1LQ9H1H1 148 aa8.25□□□□□ -1.09
PTPN2-201ENST00000309660 TRAV4A0A0B4J268 109 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 VWFP04275 2813 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
PTPN2-201ENST00000309660 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 UBE2D3P61077 147 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 UBE2D2P62837 147 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 C16orf74Q96GX8 76 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 C16orf95Q9H693 158 aa8.24□□□□□ -1.09
PTPN2-201ENST00000309660 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 CRYBA4P53673 196 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 GAGE6Q13070 117 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 CLUHP3Q96NS8 147 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 C1QTNF4Q9BXJ3 329 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 Q9H8V8 135 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 LINC00242Q5T6M2 205 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 C9JAW5 83 aa8.23□□□□□ -1.09
PTPN2-201ENST00000309660 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
PTPN2-201ENST00000309660 DAZ2Q13117 558 aaKnown RBP8.23□□□□□ -1.09
PTPN2-201ENST00000309660 DAZ4Q86SG3 579 aaKnown RBP8.23□□□□□ -1.09
PTPN2-201ENST00000309660 DAZ3Q9NR90 486 aaKnown RBP8.23□□□□□ -1.09
PTPN2-201ENST00000309660 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
PTPN2-201ENST00000309660 TRBV10-1A0A0K0K1A3 114 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 OTOGQ6ZRI0 2925 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 IL17DQ8TAD2 202 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 C19orf73Q9NVV2 129 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 A0A096LPF7 62 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 LY6G6DO95868 133 aa8.22□□□□□ -1.09
PTPN2-201ENST00000309660 CMC4P56277 68 aaPredicted RBP8.22□□□□□ -1.09
PTPN2-201ENST00000309660 CRLF1O75462 422 aa8.21□□□□□ -1.09
PTPN2-201ENST00000309660 KRTAP10-3P60369 221 aa8.21□□□□□ -1.09
PTPN2-201ENST00000309660 HERVK_113P63121 156 aa8.21□□□□□ -1.09
PTPN2-201ENST00000309660 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.09
PTPN2-201ENST00000309660 LITAFQ99732 161 aa8.21□□□□□ -1.09
PTPN2-201ENST00000309660 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
PTPN2-201ENST00000309660 INAFM1C9JVW0 142 aa8.21□□□□□ -1.1
PTPN2-201ENST00000309660 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.1
PTPN2-201ENST00000309660 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.1
PTPN2-201ENST00000309660 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
PTPN2-201ENST00000309660 DEFB4AO15263 64 aa8.2□□□□□ -1.1
PTPN2-201ENST00000309660 TRBV20-1A0A075B6N2 111 aa8.2□□□□□ -1.1
PTPN2-201ENST00000309660 GAGE12HA6NDE8 117 aa8.2□□□□□ -1.1
PTPN2-201ENST00000309660 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
PTPN2-201ENST00000309660 MIAQ16674 131 aa8.2□□□□□ -1.1
PTPN2-201ENST00000309660 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
PTPN2-201ENST00000309660 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
PTPN2-201ENST00000309660 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
PTPN2-201ENST00000309660 CDC42SE2Q9NRR3 84 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms