RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 LYRM7Q5U5X0 104 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 CHD8Q9HCK8 2581 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 ANKRD17O75179 2603 aaKnown RBP5.11□□□□□ -1.59
RGPD3-201ENST00000304514 GAGE12HA6NDE8 117 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 NDUFA12Q9UI09 145 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 APCP25054 2843 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 USP9XQ93008 2570 aaPredicted RBP5.11□□□□□ -1.59
RGPD3-201ENST00000304514 CMC4P56277 68 aaPredicted RBP5.11□□□□□ -1.59
RGPD3-201ENST00000304514 CDIP1Q9H305 208 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 DOPEY2Q9Y3R5 2298 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 HILS1P60008 231 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 SFTA2Q6UW10 78 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 NOP10Q9NPE3 64 aaKnown RBP5.1□□□□□ -1.59
RGPD3-201ENST00000304514 CDC42SE2Q9NRR3 84 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 CDKN2A-AS1Q9UH64 79 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 LOC107984156A0A0G2JMH3 177 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 H7C423 109 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 HERVK_113P63121 156 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 ARL17AQ8IVW1 177 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 SMIM1B2RUZ4 78 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 TRIAP1O43715 76 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 PIEZO1Q92508 2521 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 ZNF418Q8TF45 676 aaPredicted RBP5.1□□□□□ -1.59
RGPD3-201ENST00000304514 PPDPFQ9H3Y8 114 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
RGPD3-201ENST00000304514 YAE1D1Q9NRH1 226 aa5.1□□□□□ -1.59
RGPD3-201ENST00000304514 MAP1BP46821 2468 aaKnown RBP5.09□□□□□ -1.59
RGPD3-201ENST00000304514 ANKRD29Q8N6D5 301 aa5.09□□□□□ -1.59
RGPD3-201ENST00000304514 ICOSQ9Y6W8 199 aa5.09□□□□□ -1.59
RGPD3-201ENST00000304514 LINC00612Q8N6U2 182 aa5.09□□□□□ -1.59
RGPD3-201ENST00000304514 ERG28Q9UKR5 140 aa5.09□□□□□ -1.59
RGPD3-201ENST00000304514 LOC100131303A0A0U1RQF7 123 aa5.09□□□□□ -1.59
RGPD3-201ENST00000304514 CIDEAO60543 219 aa5.09□□□□□ -1.59
RGPD3-201ENST00000304514 MED13LQ71F56 2210 aa5.09□□□□□ -1.6
RGPD3-201ENST00000304514 TRBV6-4A0A1B0GX49 114 aa5.09□□□□□ -1.6
RGPD3-201ENST00000304514 FHL2Q14192 279 aa5.09□□□□□ -1.6
RGPD3-201ENST00000304514 TEN1Q86WV5 123 aa5.09□□□□□ -1.6
RGPD3-201ENST00000304514 ATXN8Q156A1 80 aa5.08□□□□□ -1.6
RGPD3-201ENST00000304514 RPL36AP83881 106 aaKnown RBP5.08□□□□□ -1.6
RGPD3-201ENST00000304514 RPL36ALQ969Q0 106 aaKnown RBP5.08□□□□□ -1.6
RGPD3-201ENST00000304514 SIGMAR1Q99720 223 aa5.08□□□□□ -1.6
RGPD3-201ENST00000304514 TEX15Q9BXT5 2789 aa5.08□□□□□ -1.6
RGPD3-201ENST00000304514 GEMIN7Q9H840 131 aaKnown RBP5.07□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 RPL35AP18077 110 aaKnown RBP5.07□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE4Q13068 117 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE5Q13069 117 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 LINC00482Q8N8I6 264 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 PPDPFLQ8WWR9 84 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 SPTA1P02549 2419 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 IFITM1P13164 125 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 NPC2P61916 151 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 SLC25A20O43772 301 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 SOSTDC1Q6X4U4 206 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 DAND5Q8N907 189 aa5.07□□□□□ -1.6
RGPD3-201ENST00000304514 TRRAPQ9Y4A5 3859 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 LINC00308Q8TCZ7 52 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 RPL13AP40429 203 aaKnown RBP5.06□□□□□ -1.6
RGPD3-201ENST00000304514 KMT2BQ9UMN6 2715 aaPredicted RBP5.06□□□□□ -1.6
RGPD3-201ENST00000304514 NCOR2Q9Y618 2525 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 J3QR89 54 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE7O76087 117 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE12FP0CL80 117 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE12GP0CL81 117 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 GAGE12IP0CL82 117 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 Q9H8V8 135 aa5.06□□□□□ -1.6
RGPD3-201ENST00000304514 H7C2G1 150 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 SPATA3Q8NHX4 192 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 SMR3AQ99954 134 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 SCGB1C2P0DMR2 95 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 LINC01620Q4KN68 170 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 TMEM243Q9BU79 118 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 TPRP12270 2363 aaKnown RBP5.05□□□□□ -1.6
RGPD3-201ENST00000304514 DEFB121Q5J5C9 76 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 X6R8D5 127 aa5.05□□□□□ -1.6
RGPD3-201ENST00000304514 C9JAW5 83 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 UBE2L6O14933 153 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 KIR2DL5BQ8NHK3 375 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 LST1O00453 97 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 SMAGPQ0VAQ4 97 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 TRBV6-8A0A0A6YYG3 113 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 J3QKU1 62 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 HERV-K104P63124 156 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 CLEC2BQ92478 149 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 IGLV4-60A0A075B6I1 120 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 TRAV13-1A0A0B4J241 112 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 SHISA2Q6UWI4 295 aa5.04□□□□□ -1.6
RGPD3-201ENST00000304514 AKAP6Q13023 2319 aa5.03□□□□□ -1.6
RGPD3-201ENST00000304514 XGP55808 180 aa5.03□□□□□ -1.6
RGPD3-201ENST00000304514 Q1RN00 199 aa5.03□□□□□ -1.6
RGPD3-201ENST00000304514 TRGV2A0A075B6R0 118 aa5.03□□□□□ -1.6
RGPD3-201ENST00000304514 LY6G6DO95868 133 aa5.03□□□□□ -1.6
RGPD3-201ENST00000304514 COX7B2Q8TF08 81 aa5.03□□□□□ -1.6
RGPD3-201ENST00000304514 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
RGPD3-201ENST00000304514 DGAT2L7PQ6IED9 249 aa5.02□□□□□ -1.61
RGPD3-201ENST00000304514 ITPR3Q14573 2671 aa5.02□□□□□ -1.61
RGPD3-201ENST00000304514 SETXQ7Z333 2677 aaKnown RBP5.02□□□□□ -1.61
RGPD3-201ENST00000304514 CRLF1O75462 422 aa5.02□□□□□ -1.61
RGPD3-201ENST00000304514 CITED1Q99966 193 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms