RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
HIF3A-204ENST00000300862 SETXQ7Z333 2677 aaKnown RBP9.34□□□□□ -0.91
HIF3A-204ENST00000300862 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
HIF3A-204ENST00000300862 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
HIF3A-204ENST00000300862 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
HIF3A-204ENST00000300862 LINC00467Q9BRT7 94 aa9.34□□□□□ -0.91
HIF3A-204ENST00000300862 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
HIF3A-204ENST00000300862 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
HIF3A-204ENST00000300862 F8WDY8 70 aa9.33□□□□□ -0.92
HIF3A-204ENST00000300862 INSP01308 110 aa9.33□□□□□ -0.92
HIF3A-204ENST00000300862 TIMM21Q9BVV7 248 aa9.33□□□□□ -0.92
HIF3A-204ENST00000300862 DNAJC9-AS1A6NH13 148 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 NHLRC4P0CG21 123 aaPredicted RBP9.32□□□□□ -0.92
HIF3A-204ENST00000300862 GAGE5Q13069 117 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 GAGE6Q13070 117 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 PYGO1Q9Y3Y4 419 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 MRPS36P82909 103 aaKnown RBP9.32□□□□□ -0.92
HIF3A-204ENST00000300862 EDA2RQ9HAV5 297 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 UBE2D4Q9Y2X8 147 aa9.32□□□□□ -0.92
HIF3A-204ENST00000300862 TEX29Q8N6K0 151 aa9.31□□□□□ -0.92
HIF3A-204ENST00000300862 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
HIF3A-204ENST00000300862 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
HIF3A-204ENST00000300862 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
HIF3A-204ENST00000300862 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
HIF3A-204ENST00000300862 CRLF1O75462 422 aa9.3□□□□□ -0.92
HIF3A-204ENST00000300862 PRSS2P07478 247 aa9.3□□□□□ -0.92
HIF3A-204ENST00000300862 NPC2P61916 151 aa9.3□□□□□ -0.92
HIF3A-204ENST00000300862 STHQ8IWL8 128 aa9.3□□□□□ -0.92
HIF3A-204ENST00000300862 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
HIF3A-204ENST00000300862 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
HIF3A-204ENST00000300862 C1orf158Q8N1D5 194 aa9.3□□□□□ -0.92
HIF3A-204ENST00000300862 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
HIF3A-204ENST00000300862 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
HIF3A-204ENST00000300862 CCL24O00175 119 aa9.29□□□□□ -0.92
HIF3A-204ENST00000300862 BEAN1Q3B7T3 259 aa9.29□□□□□ -0.92
HIF3A-204ENST00000300862 LINC01620Q4KN68 170 aa9.28□□□□□ -0.92
HIF3A-204ENST00000300862 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
HIF3A-204ENST00000300862 IGHV1-58A0A0C4DH39 117 aa9.28□□□□□ -0.92
HIF3A-204ENST00000300862 RS1O15537 224 aa9.28□□□□□ -0.92
HIF3A-204ENST00000300862 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
HIF3A-204ENST00000300862 TEX49A0A1B0GTD5 131 aa9.27□□□□□ -0.92
HIF3A-204ENST00000300862 Q1RN00 199 aa9.27□□□□□ -0.92
HIF3A-204ENST00000300862 Q6ZTI0 123 aa9.27□□□□□ -0.92
HIF3A-204ENST00000300862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.27□□□□□ -0.92
HIF3A-204ENST00000300862 LITAFQ99732 161 aa9.27□□□□□ -0.92
HIF3A-204ENST00000300862 SPANXA1Q9NS26 97 aa9.27□□□□□ -0.92
HIF3A-204ENST00000300862 B5MCH6 92 aa9.27□□□□□ -0.93
HIF3A-204ENST00000300862 NDUFA7O95182 113 aa9.27□□□□□ -0.93
HIF3A-204ENST00000300862 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
HIF3A-204ENST00000300862 VSIG2Q96IQ7 327 aa9.27□□□□□ -0.93
HIF3A-204ENST00000300862 CDKN2A-AS1Q9UH64 79 aa9.27□□□□□ -0.93
HIF3A-204ENST00000300862 TINCRA0A1B0GVN0 87 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 TRIAP1O43715 76 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 NDUFV3P56181 108 aaKnown RBP9.26□□□□□ -0.93
HIF3A-204ENST00000300862 ATXN8Q156A1 80 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 SNCGO76070 127 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 GAGE2EQ4V326 116 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 DGAT2L7PQ6IED9 249 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 DAND5Q8N907 189 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 GAGE2DQ9UEU5 116 aa9.26□□□□□ -0.93
HIF3A-204ENST00000300862 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
HIF3A-204ENST00000300862 COX6A2Q02221 97 aa9.25□□□□□ -0.93
HIF3A-204ENST00000300862 LINC01600Q96MT4 127 aa9.25□□□□□ -0.93
HIF3A-204ENST00000300862 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
HIF3A-204ENST00000300862 RPL13AP40429 203 aaKnown RBP9.25□□□□□ -0.93
HIF3A-204ENST00000300862 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
HIF3A-204ENST00000300862 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
HIF3A-204ENST00000300862 TMEM86BQ8N661 226 aa9.24□□□□□ -0.93
HIF3A-204ENST00000300862 NOP10Q9NPE3 64 aaKnown RBP9.24□□□□□ -0.93
HIF3A-204ENST00000300862 CSDC2Q9Y534 153 aaKnown RBP9.24□□□□□ -0.93
HIF3A-204ENST00000300862 PDZD2O15018 2839 aa9.24□□□□□ -0.93
HIF3A-204ENST00000300862 TRBV10-2A0A0K0K1G8 114 aa9.23□□□□□ -0.93
HIF3A-204ENST00000300862 PLA2G2AP14555 144 aa9.23□□□□□ -0.93
HIF3A-204ENST00000300862 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
HIF3A-204ENST00000300862 CCDC179H3BU77 68 aa9.23□□□□□ -0.93
HIF3A-204ENST00000300862 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
HIF3A-204ENST00000300862 GAGE4Q13068 117 aa9.23□□□□□ -0.93
HIF3A-204ENST00000300862 ZNF625Q96I27 306 aaPredicted RBP9.23□□□□□ -0.93
HIF3A-204ENST00000300862 TRAV8-4A0A0B4J246 113 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 A0A0U1RRA0 63 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 UBE2WQ96B02 151 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 LINC01006Q8NI28 216 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
HIF3A-204ENST00000300862 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
HIF3A-204ENST00000300862 GIG44P09565 113 aaPredicted RBP9.21□□□□□ -0.93
HIF3A-204ENST00000300862 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.93
HIF3A-204ENST00000300862 IL17DQ8TAD2 202 aa9.21□□□□□ -0.93
HIF3A-204ENST00000300862 H7C423 109 aa9.21□□□□□ -0.94
HIF3A-204ENST00000300862 IFITM1P13164 125 aa9.21□□□□□ -0.94
HIF3A-204ENST00000300862 Q6Q795 121 aa9.21□□□□□ -0.94
HIF3A-204ENST00000300862 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
HIF3A-204ENST00000300862 K7EQD1 137 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms